Query= MSMg01no236_i07.b1 MSMg01no236_i07.b1 CHROMAT_FILE:
MSMg01no236_i07.b1 PHD_FILE: MSMg01no236_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:06 2005
(234 letters)
>mm_chr16_67004340_67004973
Length = 634
Score = 429 bits (222), Expect = e-125
Identities = 231/234 (98%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 1 gtttaattttcaataggacatgaaattgtaggtacagagaaaataaggaatccaaggacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gtttaattttcaataggacatgaaattgtaggtacagagaaaataaggaatccaaggacc 347
Query: 61 caaacctagtcttgattcaagtactttatgcaaattagtaccttctgagttttgattctg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 346 caaacctagtcttgattcaagtactttatgcaaattcgtaccttctgagttttgattctg 287
Query: 121 aggaagccatttttgtttgtagttattcaacatccattttatcacaaaccctgatttact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aggaagccatttttgtttgtagttattcaacatccattttatcacaaaccctgatttact 227
Query: 181 tcccacagcattaattt-tttttaaggtttttcaagacagggtttctctgtgta 233
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 226 tcccacagcatt-atttatttttaaggtttttcaagacagggtttctctgtgta 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no236_i07.g1 MSMg01no236_i07.g1 CHROMAT_FILE:
MSMg01no236_i07.g1 PHD_FILE: MSMg01no236_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:06 2005
(359 letters)
>mm_chr16_66872377_66873135
Length = 759
Score = 661 bits (342), Expect = 0.0
Identities = 354/358 (98%)
Strand = Plus / Plus
Query: 1 aaaaattctggttttactcaggtgactttggatagctccaacttgacaatatgatctacc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaattctggttttactcaggtgactctggatagctccaacttgacaatatgatctacc 260
Query: 61 tagaacatttgtcaaaacgacgaatccagatcttatttgtttagtcttaagattttaaat 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaacatttgtcaaaacgacaaatccagatcttatttgtttagtcttaagattttaaat 320
Query: 121 tatattaatctcttatcatgcttatgatcagctttattatatgactctccctgcatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatattaatctcttatcatgcttatgatcagctttattatatgactctccctgcatgttt 380
Query: 181 gttacattcagatgtaagagtcacaactgtctcttcttaggtcttaggtccacatctcct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 381 gttacattcagatgtaagagtcacaactgtctcttcttaggtcttaggtccagatctctt 440
Query: 241 tccctgatgaattctttttttccaggtatttaagctaaaagttacaaaaatcatacatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccctgatgaattctttttttccaggtatttaagctaaaagttacaaaaatcatacatgt 500
Query: 301 ttctttctccattgcttaactcctcccttggcacatcagatagtgacgtctgctccca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctttctccattgcttaactcctcccttggcacatcagatagtgacgtctgctccca 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
