Query= MSMg01no237_o05.b1 MSMg01no237_o05.b1 CHROMAT_FILE:
MSMg01no237_o05.b1 PHD_FILE: MSMg01no237_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:49 2005
(665 letters)
>mm_chr16_48931021_48932085
Length = 1065
Score = 1243 bits (643), Expect = 0.0
Identities = 658/663 (99%), Gaps = 2/663 (0%)
Strand = Plus / Plus
Query: 4 ggaattccatttta-tctataaaaaactagttgatatttcacaagaaaaggctcttacca 62
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccattttact-tataaaaaactagttgatatttcacaagaaaaggctcttacca 262
Query: 63 ggggtggtctaggctgtacagctgcagagatgactccagggcaaactgcaggcatttgag 122
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggggtggtctaggttgtacagctgcagagatgactccagggcaaactgcaggcatttgag 322
Query: 123 ggacagtaagtatgggtcgaaagaaagattccttcacaaggggtcttcctaagaattgct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggacagtaagtatgggtcgaaagaaagattccttcacaaggggtcttcctaagaattgct 382
Query: 183 gtatctaacataaaaaggcaaaacagaacaaaatgaaacaaaatcctgaacattaaagac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtatctaacataaaaaggcaaaacagaacaaaatgaaacaaaatcctgaacattaaagac 442
Query: 243 ttacctggccaaaagtcatagagctatgcagggggtaaaacacgggtttgaaattcagat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttacctggccaaaagtcatagagctatgcagggggtaaaacacgggtttgaaattcagat 502
Query: 303 acaaagtacattaaaagcaatgtatgtcaggatattacttaaatctagtagaacctgaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acaaagtacattaaaagcaatgtatgtcaggatattacttaaatctagtagaacctgaaa 562
Query: 363 aagcaaagaaagtgtgatagaagaactggcttgtatacctttgaatgccaaatttttagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagcaaagaaagtgtgatagaagaactggcttgtatacctttgaatgccaaatttttagt 622
Query: 423 ctataatataagtgggttggacaaagtgatatttaaggttcaccctcagataaaataaag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctataatataagtgggttggacaaagtgatatttaaggttcaccctcagataaaataaag 682
Query: 483 agcaaagacctaataagactttcaaaggtataatatgtatagaaacctcaaatgccttgg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agcaaagacctaataagactttcaaaggtataatatgtatagaaacctcaaatgccttgg 742
Query: 543 tgaatcctctccatgttgacagataattctcagaaatttcattttaaaaatcctcaaaat 602
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 743 tgaatcctctccatgttgacagataatactcagaaatttcattttaaaaatcctcaaaat 802
Query: 603 tatccatataaaatatagcttcctcaatcatgtactgaatgtgccatgtgatataaccag 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 803 tatccatataaaatatagcttcctcaatcatgtactgaatgtgccatgtgatataatcag 862
Query: 663 gac 665
|||
Sbjct: 863 gac 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_o05.g1 MSMg01no237_o05.g1 CHROMAT_FILE:
MSMg01no237_o05.g1 PHD_FILE: MSMg01no237_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:49 2005
(637 letters)
>mm_chr16_49038246_49039283
Length = 1038
Score = 1185 bits (613), Expect = 0.0
Identities = 627/632 (99%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 1 acagtagccaaggaatcaaaacaatctaaatgtcctaaaatatatgacaagatagtgaag 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 900 acagtagccaaggaatcaaaacaatctaaatgtcctaaaatagatgaaaagatagtgaag 841
Query: 61 atgtacatattcaacaatggaatagtattcacctatttatacaaacaaacaaagaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 atgtacatattcaacaatggaatagtattcacctatttatacaaacaaacaaagaagaaa 781
Query: 121 acttcaccccaatatgggtgatgactcatgtaatctggaaacctagaacactctgcacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 acttcaccccaatatgggtgatgactcatgtaatctggaaacctagaacactctgcacaa 721
Query: 181 cttgcaggcaggtcaagaggttggtctttcagtagcagtacctactatgtacaaaatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cttgcaggcaggtcaagaggttggtctttcagtagcagtacctactatgtacaaaatctt 661
Query: 241 gaagagtgagggatctcttaaatatt-ccgatatcttgagatttgtgagctattttcttc 299
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 660 gaagagtgagggatctcttaaatattagcgatatcttgagatttgtgagctattttcttc 601
Query: 300 ctaagtcctaaggagcctcccaccagaactttcagaaacttagggtgctgtggtccagga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctaagtcctaaggagcctcccaccagaactttcagaaacttagggtgctgtggtccagga 541
Query: 360 tggaatattgtagttcagaggaaatttctataaaatgtatacctactatcttcccacata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tggaatattgtagttcagaggaaatttctataaaatgtatacctactatcttcccacata 481
Query: 420 gagccccagctcttgcatgtttgtgactttgcaaagtacccaggtcttttaggaaaaata 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gagccccagctcttgcatgtttgtgactttgcaaagtacccaggtcttttaggaaaaata 421
Query: 480 ctccttactctgtcttcatacattttagaatggatagtcttttcaataagtgataggaaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ctccttactctgtcttcatacattttagaatggatagtcttttcaataagtgataggaaa 361
Query: 540 cttgtatattcacatgcagaanaatgataagtagacatgtattcccaatagttgcaaaaa 599
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cttgtatattcacatgcagaaaaatgataagtagacatgtattcccaatagttgcaaaaa 301
Query: 600 caaaaaacaaaacaaaacaaaacaaaacaaaa 631
||||||||||||||||||||||||||||||||
Sbjct: 300 caaaaaacaaaacaaaacaaaacaaaacaaaa 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
