Query= MSMg01no263_c08.b1 MSMg01no263_c08.b1 CHROMAT_FILE:
MSMg01no263_c08.b1 PHD_FILE: MSMg01no263_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:59 2005
(653 letters)
>mm_chr16_42007299_42008350
Length = 1052
Score = 1201 bits (621), Expect = 0.0
Identities = 642/649 (98%), Gaps = 1/649 (0%)
Strand = Plus / Plus
Query: 5 gaattctcccacctctactacctgataaccaagggtaccaaaattatctcccttaataag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcccacctctactacctgataaccaagggtaccaaaattatctcccttaataag 264
Query: 65 taggtaaatactctatttttaaagaaattttgtgaatacaaagtgtcatgttcccaccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggtaaatactctatttttaaagaaattttgtgaatacaaagtgtcatgttcccaccct 324
Query: 125 aaggatctgtgttttcacaccccatggaaatgcctacatatatctgtgatatgtacattc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 aaggatctgtgttttcacaccccatggaaatgcctacatatatctgtgatatatacattc 384
Query: 185 aaatgcacagctaaaatattcatatatacagaactcaaatcaagaactggcctaaaagta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaatgcacagctaaaatattcatatatacagaactcaaatcaagaactggcctaaaagta 444
Query: 245 ccttgttagtgggcatgcctgagcaggcagacccaaacacaactggggtccaaggactgg 304
||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct: 445 ccttgttagtgggcatgcccgagcaggcagacccaaatacaactggggtccaaggactag 504
Query: 305 atgaaacctttacttctgtagactaacaaatgaactcactcaaattaatgtgtgaacttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgaaacctttacttctgtagactaacaaatgaactcactcaaattaatgtgtgaacttg 564
Query: 365 atgacttctatcattggaaatctatgagtacatacattctaccaataggtaaacaccggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 565 atgacttctatcattggaaatctatgagtacatacattctaccaataggtaaacaccagc 624
Query: 425 ttggcagtattatcattgctgttataacaaaggcccaaaccatgagcccttaaagctttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttggcagtattatcattgctgttataacaaaggcccaaaccatgagcccttaaagctttc 684
Query: 485 cggatgaaaggcttacaagcagaaaacaatctgccctagcgtttgctctgcagacttcaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cggatgaaaggcttacaagcagaaaacaatctgccctagcgtttgctctgcagacttcaa 744
Query: 545 attacttttcaaccttttctctgtatttatccaactcattgcacaagatgaaacacctat 604
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 745 attacttttcaaccttttctctgtatttatccaactcattgcaaaagatgaaacacctat 804
Query: 605 tccaaagtgaggaatgagacttctgggggggaatactattttttaggat 653
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 805 tccaaagtgaggaatgagacttctgggggg-aatactattttttaggat 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1052
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1042
Effective search space: 670006
Effective search space used: 670006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_c08.g1 MSMg01no263_c08.g1 CHROMAT_FILE:
MSMg01no263_c08.g1 PHD_FILE: MSMg01no263_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:59 2005
(287 letters)
>mm_chr16_42145721_42146407
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Minus
Query: 1 cttaggtcaggaaggaatgggtaactacatctcttagtgtgtagttccccaagggtatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 cttaggtcaggaaggaatgggtaactacatctcttagtgtgtagttccccaagggtatgg 428
Query: 61 tgagtattgtctccagttggagcaaagacttttcacatttagtctttagagacaaataag 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 427 tgagtattgtctccagttggagcaaagacttttcacatttagtcgttagagacaaataag 368
Query: 121 cagtataggagttttcagcctcacgttgatgtagcatttgtatagctatcccccatgcaa 180
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 367 caggataggagttttcagcctcacattgatgtagcatttgtatagctatcccccatgcaa 308
Query: 181 cgaccacagaccgaagccagactattaagaatgagaaacttaaagccatgtctagggtag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggaccacagaccgaagccagactattaagaatgagaaacttaaagccatgtctagggtag 248
Query: 241 tttatggttgttgttttacaaaagtagtgttaggtatttagcaattt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tttatggttgttgttttacaaaagtagtgttaggtatttagcaattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
