Query= MSMg01no263_d16.b1 MSMg01no263_d16.b1 CHROMAT_FILE:
MSMg01no263_d16.b1 PHD_FILE: MSMg01no263_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:05 2005
(545 letters)
>mm_chr16_38664286_38665230
Length = 945
Score = 994 bits (514), Expect = 0.0
Identities = 535/542 (98%), Gaps = 1/542 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccctcttactcaagctcttagagcttccagtgctccctcagtcatgataaccc 64
||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 204 gaattcaccctcttattcaagctcttagagcttccagtcctccctcagtcatgataaccc 263
Query: 65 aggctcttcccgactttccttgccagaaattccagtctgtttcttgccttccaattcagg 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 aggctcttcccgactttccttgccagaaattccagtctgtttcttgccttcccattcagg 323
Query: 125 cttactcagtgcaaaaaaa-ccagttccaaaatagcttgtttggtttgtatacagtggtg 183
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttactcagtgcaaaaaaaaccagttccaaaatagcttgtttggtttgtatacagtggtg 383
Query: 184 gcctagaacatctgtcacgctgagcaggccattggtttactttctgtttgtttgaaacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcctagaacatctgtcacgctgagcaggccattggtttactttctgtttgtttgaaacag 443
Query: 244 gtctcacacagcccttgaacttgtcacatagctaaggctggctttgaactcccgatcccc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtctcacacagcccttgaacttgtcacatagctaaggctggctttgaactcccgatcccc 503
Query: 304 tgcttccactttccaagtgctggcattaaaagtgtgtggaaccatgctgagctagagcag 363
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgcttccactttccaagtgctgggattaaaagtgtgtggaaccatgctgagctagagcag 563
Query: 364 gccatttgtaatgctgctctctctgtggaatggaattatgctccattataagcatatcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gccatttgtaatgctgctctctctgtggaatggaattatgctccattataagcatatcaa 623
Query: 424 aagagtaactggttaacaaacaatgtaattttacttgaattaattaatatgttattgttg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagagtaactggttaacaaacaatgtaattttacttgaattaattaatatgttattgttg 683
Query: 484 tatgtatgtgtctgacatgcatgtgggggtgttgtttccacagtgcacctgtggaggttg 543
||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 684 tatgtatgtgtctgacatgcatgtgtgggtgttgtttccacagtgcacgtgtggaggttg 743
Query: 544 ga 545
||
Sbjct: 744 ga 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_d16.g1 MSMg01no263_d16.g1 CHROMAT_FILE:
MSMg01no263_d16.g1 PHD_FILE: MSMg01no263_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:05 2005
(621 letters)
>mm_chr16_38784483_38785503
Length = 1021
Score = 1193 bits (617), Expect = 0.0
Identities = 620/621 (99%)
Strand = Plus / Minus
Query: 1 caaaccgaatggtcatttcttccagagatatgcagagaactgagctgacccacaccccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 caaaccgaatggtcatttcttccagagatatgcagagaactgagctgacccacaccccat 762
Query: 61 tttggtccgagtacctaacactagccccattccaagtagcagctgatcaaaaagggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tttggtccgagtacctaacactagccccattccaagtagcagctgatcaaaaagggtttg 702
Query: 121 tactccctgactgcttggataccacatttagatgaatatgcttaggactcacagcaacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 tactccctgactgcttggataccacatttagatgaatatgcttaggactcacagcaacca 642
Query: 181 cttggtgagatgtctgttataatcctccgttctcatctctttccctcccagtacttcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cttggtgagatgtctgttataatcctccgttctcatctctttccctcccagtacttcatc 582
Query: 241 atgatgtttatagtgtacggttttgaagtggcatcttgcatcacagcagcaacacaacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atgatgtttatagtgtacggttttgaagtggcatcttgcatcacagcagcaacacaacgc 522
Query: 301 gactttgtgagtatagtccccaatgcatggagcaaaaatgacactccagcaactgacatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gactttgtgagtatagtccccaatgcatggagcaaaaatgacactccagcaactgacatg 462
Query: 361 cttcgacccctcgctgtgtgctcgtcgtgccaatacacacactattaatacccatgcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cttcgacccctcgctgtgtgctcgtcgtgccaatacacacactattaatacccatgcagt 402
Query: 421 atcgggaagccttgcttgtcgtttctaaattaaaagagaaaggcactaaacgctaagaga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 401 atcgggaagccttgcttgtcgtttctaaattaaaagagaaaggcactaaacgctaagaaa 342
Query: 481 tgtatctaggaatgaatggctgacaggtcacagcaggaattctgagtcgaagaagcctga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgtatctaggaatgaatggctgacaggtcacagcaggaattctgagtcgaagaagcctga 282
Query: 541 ttcccaatgcccaagctgggatcccggccggcactgactgccattcgtccacaccatggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttcccaatgcccaagctgggatcccggccggcactgactgccattcgtccacaccatggc 222
Query: 601 ctttctgcatgttctgcctcg 621
|||||||||||||||||||||
Sbjct: 221 ctttctgcatgttctgcctcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
