Query= MSMg01no263_e05.b1 MSMg01no263_e05.b1 CHROMAT_FILE:
MSMg01no263_e05.b1 PHD_FILE: MSMg01no263_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:08 2005
(328 letters)
>mm_chr16_76627180_76627907
Length = 728
Score = 561 bits (290), Expect = e-164
Identities = 314/322 (97%)
Strand = Plus / Plus
Query: 5 gaattcaacagcatctgacaaaaggaagtagagaaattttctaacacgtctgaccccagt 64
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaacagcatctgataaaaggaaatagagaaattttctaacacgtctgaccccagt 264
Query: 65 aaaacaaaacgtttgcccacttggcgtgaacacgctttgtaactttccattagagacttg 124
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aaaacaaaacgtttgtagacttggcgtgaacatgctttgtaactttccattagagacttg 324
Query: 125 agctggctgacataaaatccacacagacgtaaaattcaaactacgtacatagcaaggtag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agctggctgacataaaatccacacagacgtaaaattcaaactacgtacatagcaaggtag 384
Query: 185 aaaagtaaaggttacggataagagaaggggagctggagagatgactcagtggttgggagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaagtaaaggttacggataagagaaggggagctggagagatgactcagtggttgggagt 444
Query: 245 acttactgccattccataggacccaagttcaggtcctggtactcactccagtggatccaa 304
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 445 acttactgccattccataggacccaagttcaggtcctgatactcactccaggggatccaa 504
Query: 305 ccccacttctatccttttattc 326
||||||||||||||||||||||
Sbjct: 505 ccccacttctatccttttattc 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_e05.g1 MSMg01no263_e05.g1 CHROMAT_FILE:
MSMg01no263_e05.g1 PHD_FILE: MSMg01no263_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:08 2005
(661 letters)
>mm_chr16_76695053_76696116
Length = 1064
Score = 1224 bits (633), Expect = 0.0
Identities = 656/665 (98%), Gaps = 5/665 (0%)
Strand = Plus / Minus
Query: 1 gctaagaattcttaattagatcctatgcaaacaagagttaaggtcctctgaactacagta 60
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gctaaggattcttaatttgatcctatgcaaacaagagttaaggtcctctgaactacagta 805
Query: 61 agtgattattaaaaattatataagcagaaaggactaggaggaacttagaaaatgccattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agtgattattaaaaattatataagcagaaaggactaggaggaacttagaaaatgccattg 745
Query: 121 tataaatcataataaaaaagaaagttaaggtcgtgttgacccacagtgttaagggaacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tataaatcataataaaaaagaaagttaaggtcgtgttgacccacagtgttaagggaacac 685
Query: 181 tgtctactaaacacaaaaggaaacaaattgtcccatttcgtttgtccagtggttgcaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtctactaaacacaaaaggaaacaaattgtcccatttcgtttgtccagtggttgcaaat 625
Query: 241 gaaagaggatattttgaggaacgggattaataaaatagtaaaataaatagaaataaaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaaagaggatattttgaggaacgggattaataaaatagtaaaataaatagaaataaaagc 565
Query: 301 tgataattaaagacgtaatgtaattcaaacccgggctaaacaatggtacttctct-cttg 359
|| |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 564 tggtaattaaagatgtaatgtaattcaaacccgggctaaacaatggtacttct-tgcttg 506
Query: 360 attctacttctt---aatcacagaaataacacaccctccaggctgtgttccctcttattt 416
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attctacttcttcttaatcacagaaataacacaccctccaggctgtgttccctcttattt 446
Query: 417 gtcatctcataaaggaacatagccagtttgaaaagcccagccctccaaaagaggttcacc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcatctcataaaggaacatagccagtttgaaaagcccagccctccaaaagaggttcacc 386
Query: 477 ttttcaccccaatcttcgtcgtcgcctggcttagccagagaacattggcagctgcaccga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttttcaccccaatcttcgtcgtcgcctggcttagccagagaacattggcagctgcaccga 326
Query: 537 ctcccacatgtcaggtcttggccacaccacatcctttgtctttctctgtgtcaggttccc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcccacatgtcaggtcttggccacaccacatcctttgtctttctctgtgtcaggttccc 266
Query: 597 tcaaccctgatcggctgtcaataagggaagtgagtcagagaggacccaggaacagtgctg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcaaccctgatcggctgtcaataagggaagtgagtcagagaggacccaggaacagtgctg 206
Query: 657 tcaag 661
|||||
Sbjct: 205 tcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1064
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1054
Effective search space: 686154
Effective search space used: 686154
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
