Query= MSMg01no264_i14.b1 MSMg01no264_i14.b1 CHROMAT_FILE:
MSMg01no264_i14.b1 PHD_FILE: MSMg01no264_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:45 2005
(316 letters)
>mm_chr16_9796669_9797383
Length = 715
Score = 543 bits (281), Expect = e-159
Identities = 302/309 (97%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 5 gaattctctctgctcctctgccctgaagctcacagcttatttcttcacatttaaatctag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctctgctcctctgccctgaagctcacagcttatttcttcacatttaaatctag 264
Query: 65 gtaaagaagcagggcttgctctgctgtccactggagagactggagtagataccaagccag 124
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
Sbjct: 265 gtaaagaagcagggcttgctctgttgtccactggagagact-gagtagataccaagccgg 323
Query: 125 aaaaatccccacgacttcttttcttaagctcagcttgtgttttaaagcatttgaaaagaa 184
||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||
Sbjct: 324 aaaaatccccacgacttcttttcttcagctcagtttgtgttttaaagcatttgaaaggaa 383
Query: 185 gtgctcttgagatatggggataaagatataactggatatactaaagaaaagaggcctcga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgctcttgagatatggggataaagatataactggatatactaaagaaaagaggcctcga 443
Query: 245 ggattatttacctactgagaagtctaagaaggaattaacgtgggaggaaaataaatctgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggattatttacctactgagaagtctaagaaggaattaacgtgggaggaaaataaatctgg 503
Query: 305 aatccagtt 313
||||||||
Sbjct: 504 gatccagtt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_i14.g1 MSMg01no264_i14.g1 CHROMAT_FILE:
MSMg01no264_i14.g1 PHD_FILE: MSMg01no264_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:45 2005
(287 letters)
>mm_chr16_9961359_9962048
Length = 690
Score = 495 bits (256), Expect = e-144
Identities = 281/290 (96%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1 cattggcttactgaacattccaggagaaag-atatgctttggattggaccagatgaaaga 59
|||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 490 cattggcttactgaacattccaggagaaagaatatgctttggattggagaagatgaaaga 431
Query: 60 ccgtatttgccattgtctacataatgagctatgacagaaaacttcactgggctgggggtc 119
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 430 ccgtatttgccattgtctacataatgagctatgacagaaaaattcactgggctgggggtc 371
Query: 120 agggagaactaggagtcttgacagagataatccactca--ctgtgagtttggctgtatct 177
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 370 agggagaactaggagtcttgacggagataatccactcactctgtgagtttggctgtatct 311
Query: 178 ttcctggagctcgatcaccacatctatgaagtagatttgtactgagtcatttaggaatcc 237
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 310 ttcctggagctcgatcaccacatctatgaagcagatttgtactgagtcattcaggaatcc 251
Query: 238 cttgcttttccttcctcagacacttttaaaaaattatcattttgcttttt 287
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cttgcttttccttcctcagacacttttaaaaaattatcattttgcttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 690
Length adjustment: 9
Effective length of query: 278
Effective length of database: 681
Effective search space: 189318
Effective search space used: 189318
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
