Query= MSMg01no266_a01.b1 MSMg01no266_a01.b1 CHROMAT_FILE:
MSMg01no266_a01.b1 PHD_FILE: MSMg01no266_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:40 2005
(558 letters)
>mm_chr16_46374444_46375401
Length = 958
Score = 826 bits (427), Expect = 0.0
Identities = 490/525 (93%), Gaps = 23/525 (4%)
Strand = Plus / Minus
Query: 5 gaattctaagttaatttcttagtgtggtagaggaaattttagggctgtaaaatactcaag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 502 gaattctaagttaatttattagtgtggtagaggaaattttagggctgtaaaatacccaag 443
Query: 65 aggtggcatagttgtagcttgctgatattgatgtagtttgactttcttcaatccatccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggtggcatagttgtagcttgctgatattgatgtagtttgactttcttcaatccatccag 383
Query: 125 ctaatcacccaaaggccccgggatagttcagagtctctctgtgcttccacccttctctct 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 382 ctaatcacccaaaggccccgggatagttcagagtctctctgtgcttccacccgtctctct 323
Query: 185 agtcttacagctttcgtccattgatattgatgatgcgacagatcgtccatgtgaggctga 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 322 agtcttacagctttcgtccattgatattgatgatgccacagatcgtccatgtgaggctga 263
Query: 245 ttctgtaagcatactaaatgtaagtattataagctcgtggatgcttacacctaggttcta 304
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 262 ttctgtaagcatactgaatgtaagtattataagctcgtggatgcttacacctaggttcca 203
Query: 305 aaaaaaaaaaaaaaaaaaaagccgtgaaggttaagaagagtgtaacaggctcccattgcc 364
|||||| ||| | ||||| ||||||||||||||||||||||||||||
Sbjct: 202 aaaaaa--------------gccattaaggtcaagaagagtgtaacaggctcccattgcc 157
Query: 365 tgtagagagaacccttgggaagtcagtgctgcaaatgatgaggctggagcctgagctaca 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 156 tgtagagagaagccttgggaagtcagtgctgcaaatgatgaggctggagcctgagctgca 97
Query: 425 gttgagacacaaggatgctgaaggtggcaggaacttcggaatcaccaaggaaatttttag 484
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gttgagacacaaggatgctgaaggtggcaggaacttcggaatcaccaaggaaatttttaa 37
Query: 485 gtgccaaatagagccaatctaaaagagaagacatgtgtgcttcaa 529
||||||||| |||||||||||||||||||||||||||
Sbjct: 36 gtgccaaat---------ctaaaagagaagacatgtgtgcttcaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space: 519504
Effective search space used: 519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_a01.g1 MSMg01no266_a01.g1 CHROMAT_FILE:
MSMg01no266_a01.g1 PHD_FILE: MSMg01no266_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:40 2005
(213 letters)
>mm_chr16_46224085_46224697
Length = 613
Score = 391 bits (202), Expect = e-113
Identities = 208/210 (99%)
Strand = Plus / Plus
Query: 1 cagtgggctttaaaataatttattagcacagaaactcttatagaatgcccgagaggtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cagtgggctttaaaataatttattagcacagaaactcttatagaatgccagagaggtaaa 260
Query: 61 aatattccgcatttcttctttttattaattgataattccatatatgtattttatgtacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatattccgcatttcttctttttattaattgataattccatatatgtattttatgtacat 320
Query: 121 gcatatgaatatgtatatatatacatacatatatgatacttatgtgtatgttatatgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatatgaatatgtatatatatacatacatatatgatacttatgtgtatgttatatgtat 380
Query: 181 tatatgtgtatatatgtatatatgtttatg 210
|||||||||||||||||||||||||||||
Sbjct: 381 gatatgtgtatatatgtatatatgtttatg 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 613
Length adjustment: 9
Effective length of query: 204
Effective length of database: 604
Effective search space: 123216
Effective search space used: 123216
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
