Query= MSMg01no266_e07.b1 MSMg01no266_e07.b1 CHROMAT_FILE:
MSMg01no266_e07.b1 PHD_FILE: MSMg01no266_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:01 2005
(578 letters)
>mm_chr16_29880464_29881441
Length = 978
Score = 851 bits (440), Expect = 0.0
Identities = 490/516 (94%), Gaps = 15/516 (2%)
Strand = Plus / Minus
Query: 1 aggcaactgaggctcagataactttgccgagttactcaggtctctgctagcacctttttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 516 aggcaactgaggctcagataactttgccgagttactcaggtctctgctaggacctttttg 457
Query: 61 acttccagctctgagctcttcagtctaccagtcagtgggcaggttgccttcttctaaccc 120
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 456 acttccagctctgagctcttcagtctaccggtcagtgggcaggttgccctcttctaaccc 397
Query: 121 aactacattgtctcttcatgtctatgaaggtcctggcttattttctagagccaattttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aactacattgtctcttcatgtctatgaaggtcctggcttattttctagagccaattttcc 337
Query: 181 agagttcagaggtacactggccaacacaaaataaaataaaaacaaacaaacgaaaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agagttcagaggtacactggccaacacaaaataaaataaaaacaaacaaacgaaaaaaca 277
Query: 241 tattccatgggtggctctggctccccatagccaattatattctttattgttgttcgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tattccatgggtggctctggctccccatagccaattatattctttattgttgttcgtttt 217
Query: 301 gctttgctttgttttgttttgttttgttttg---------------agacagtgttcctg 345
| |||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 216 gttttgttttgttttgttttgttttgttttgttttgttttgttttgagacagtgttcctg 157
Query: 346 cacagccttgactgtcttggatctcactttgcagacctgcctggtcttgaactcattcgc 405
| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 156 tgtatccttgactgtcttggatctcactttgcagacctggctggtcttgaactaattcgc 97
Query: 406 agagatccacctgcctctgtgtcctcagagcagggataaaaggcatgtgccaccatcacc 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 agagatccacctgcctctgtgtcctcagagcagggataaaaggcatgtgccaccatcacc 37
Query: 466 tggtgccagtgatattcttaattgttgcagtgactt 501
||||||||||||||||||||||||||||||||||||
Sbjct: 36 tggtgccagtgatattcttaattgttgcagtgactt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_e07.g1 MSMg01no266_e07.g1 CHROMAT_FILE:
MSMg01no266_e07.g1 PHD_FILE: MSMg01no266_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:01 2005
(245 letters)
>mm_chr16_29728896_29729544
Length = 649
Score = 435 bits (225), Expect = e-126
Identities = 240/247 (97%), Gaps = 4/247 (1%)
Strand = Plus / Plus
Query: 1 ctggccatcgttggcgtccctttctgccagtctctgccagcaggtggccctcacagctct 60
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 ctggccatctttggcgtccctttctgccagtctctgccagcaggtggcgctcacagctct 260
Query: 61 cagacaacacaatgggcacctaggttctgaacttctggcct----cccccccccccacct 116
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cagacaacacaatgggcacctaggttctgaacttctggccttccccccccccccccacct 320
Query: 117 ttggaatggcataatttgggagtcatctatgggacgactgccaaggtcttaaattttcta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggaatggcataatttgggagtcatctatgggacgactgccaaggtcttaaattttcta 380
Query: 177 cgtggggtttggataattttctccagacggcttggagaactggactggacgggaggaaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 cgtggggtttggataattttctccagacggcttggagaactggactggatgggaggaaaa 440
Query: 237 ggggcag 243
|||||||
Sbjct: 441 ggggcag 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 649
Length adjustment: 9
Effective length of query: 236
Effective length of database: 640
Effective search space: 151040
Effective search space used: 151040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
