Query= MSMg01no266_f20.b1 MSMg01no266_f20.b1 CHROMAT_FILE:
MSMg01no266_f20.b1 PHD_FILE: MSMg01no266_f20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:08 2005
(324 letters)
>mm_chr16_92204151_92204873
Length = 723
Score = 584 bits (302), Expect = e-171
Identities = 314/318 (98%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 5 gaattcataggattttactccagccccttgacatctctgaaaggtcttcaaggtaaacag 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattcataggattttattccagccccttgacatctctgaaaggtcttcaaggtaaacag 462
Query: 65 ttgaaacgattcaattccaatgctttgaactcgagcaaagataaacagagctgaagaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttgaaacgattcaattccaatgctttgaactcgagcaaagataaacagagctgaagaatg 402
Query: 125 cacatcaaattctaggcagacatagaatcgttcctaaatggaattgtcagattataaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cacatcaaattctaggcagacatagaatcgttcctaaatggaattgtcagattataaata 342
Query: 185 tcacacatttggatttcagttagcaccgagaggcacaccctcaatgaagacagatgagag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcacacatttggatttcagttagcaccgagaggcacaccctcaatgaagacagatgagag 282
Query: 245 agtgaactggggagttatggggtaggagccaggattctctgggaaacacgcttcatatcc 304
|||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||
Sbjct: 281 agtgaactggggagttatggggtaggagccagga-tccctgggaaacatgcttcatatcc 223
Query: 305 tttccctcttgctttctc 322
||||||||||||||||||
Sbjct: 222 tttccctcttgctttctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_f20.g1 MSMg01no266_f20.g1 CHROMAT_FILE:
MSMg01no266_f20.g1 PHD_FILE: MSMg01no266_f20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:08 2005
(293 letters)
>mm_chr16_92056872_92057565
Length = 694
Score = 493 bits (255), Expect = e-144
Identities = 290/319 (90%), Gaps = 29/319 (9%)
Strand = Plus / Plus
Query: 1 tcgtctcaatgtccagaaattctttcttccttctgtgtc--------------------- 39
|||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tcgtctcaatgtccagaaattctttcttccttctgtgtcttttttttttttttttttttt 232
Query: 40 ------ttttttttttttttggtagcatgctgcttaaaaac-aaaaacaaccaaccaacc 92
||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 233 ttttttttttttttttttttggtagcatgctgcttaaaaacaaaaaacaaccaaccaacc 292
Query: 93 aaaacaaacaaactaaaaagacccccaacaacaaccaaaacaaaacaatccaaccaacca 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaaacaaacaaactaaaaagacccccaacaacaaccaaaacaaaacaatccaaccaacca 352
Query: 153 ggtgtgtggctgatgctaagtaggtggttttgtagtttgtgttgaagggcacaggacaaa 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggtgtgtggctgatgctaagtaggtggttttgtagtttgtgttgaagggcacaggacaaa 412
Query: 213 ccttgaaatgttaatgaaaatgttaaaaaa-ccaggtatcctaggttgtattcaaaacca 271
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 413 ccttgaaatgttaatgaaaatgttaaaaaaaccaggtatcctaggttgtattcaaaacca 472
Query: 272 taatcttctgtggagattg 290
|||||||||||||||||||
Sbjct: 473 taatcttctgtggagattg 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 694
Length adjustment: 9
Effective length of query: 284
Effective length of database: 685
Effective search space: 194540
Effective search space used: 194540
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
