Query= MSMg01no267_c20.b1 MSMg01no267_c20.b1 CHROMAT_FILE:
MSMg01no267_c20.b1 PHD_FILE: MSMg01no267_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:09 2005
(317 letters)
>mm_chr16_10748495_10749211
Length = 717
Score = 553 bits (286), Expect = e-162
Identities = 307/314 (97%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 5 gaattccacaatcagcctctattgtacatagaatagcagatggagacatagttgaggcta 64
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattccacagtcagcttctattgtacatagaatagcagatggagacatagttgaggcta 458
Query: 65 gctcttatactttgggccttgagagtccctggagctcttcagctgcggcacaatgtgatg 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 457 gctcttatactttgggccttgagagtccctggagctcttcagttgcggcacaatgtgatg 398
Query: 125 caatggaacatgctgtagaacatgtgaggacctggactaaagactgttattgc-agtgca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 397 caatggaacatgctgtagaacatgtgaggacctggactaaagactgttattgcaagtgca 338
Query: 184 gggctctgcagtgtgggatcttccatcatgggaatgtgtgtgaggggactgtgtgactct 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 337 gggctctgcagtgtgggatcttccatcatgggagtgtgtgtgaggggactgtgtgactct 278
Query: 244 tggtctctttttctttcattttccagctgtgacactgtcagctctgctttgcaaccatct 303
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 277 tggtct-tttttctttcattttccagctgtgacactggcagctctgctttgcaaccatct 219
Query: 304 gctgcacagttata 317
||||||||||||||
Sbjct: 218 gctgcacagttata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_c20.g1 MSMg01no267_c20.g1 CHROMAT_FILE:
MSMg01no267_c20.g1 PHD_FILE: MSMg01no267_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:10 2005
(293 letters)
>mm_chr16_10600522_10601214
Length = 693
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Plus
Query: 1 caggatatggccagagttgtcacatcaagaaatcaatgtctttgtgtcctgaccttctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggatatggccagagttgtcacatcaagaaatcaatgtctttgtgtcctgaccttctcg 260
Query: 61 gttctcccagtactgtcatcacttatgtggtatgtagaagatgaagatgcccttgcctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttctcccagtactgtcatcacttatgtggtatgtagaagatgaagatgcccttgcctgc 320
Query: 121 ttttggttcctgtctgtcttttctcttcctacttcatccttctcctcttcttcttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttggttcctgtctgtcttttctcttcctacttcatccttctcctcttcttcttttatt 380
Query: 181 tcttttttattgtggtaagattctggcaaatgaaccctcactactttgaagcatacgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttttttattgtggtaagattctggcaaatgaaccctcactactttgaagcatacgagt 440
Query: 241 cagcagtgctaatggttccatcttgtgtgtccattgccatcatttccagaa 291
|||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcagtgctaagggttccatcttgtgtgtccattgccatcatttccagaa 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
