Query= MSMg01no267_o18.b1 MSMg01no267_o18.b1 CHROMAT_FILE:
MSMg01no267_o18.b1 PHD_FILE: MSMg01no267_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:06 2005
(224 letters)
>mm_chr16_9797068_9797692
Length = 625
Score = 377 bits (195), Expect = e-109
Identities = 207/211 (98%), Gaps = 1/211 (0%)
Strand = Plus / Plus
Query: 11 ctgggaatatatgaaacgagaaaaccccaagcctgggagacattacaagctgatcaaccc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctgggaatatatgaaacgagaaaaccccaagcctgggagacattacaagctgatcaaccc 270
Query: 71 cctcacagagagaaatagtggacgcatcaaatgtggtccattccccctaagaaacccaga 130
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 271 cctcacagagagaaatagtggacacatcaaatgtggtccattccccctaagaaacccaga 330
Query: 131 ctagttggtttaaaaagaaatctatttgaaagtggaggcatg-gtgcggtgaatgctaaa 189
|||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||||||
Sbjct: 331 ctagttggtttaaaaagaaatctatttgaaagtggaagcatgtgtgcagtgaatgctaaa 390
Query: 190 gtgtgcagaattctctagaatatgggaaact 220
|||||||||||||||||||||||||||||||
Sbjct: 391 gtgtgcagaattctctagaatatgggaaact 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 625
Length adjustment: 9
Effective length of query: 215
Effective length of database: 616
Effective search space: 132440
Effective search space used: 132440
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no267_o18.g1 MSMg01no267_o18.g1 CHROMAT_FILE:
MSMg01no267_o18.g1 PHD_FILE: MSMg01no267_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:06 2005
(229 letters)
>mm_chr16_9961363_9961993
Length = 631
Score = 404 bits (209), Expect = e-117
Identities = 225/231 (97%), Gaps = 2/231 (0%)
Strand = Plus / Minus
Query: 1 aaagaccgtatttgccattgtctacataatgagctatgacagaaaacttcactgggctgg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 431 aaagaccgtatttgccattgtctacataatgagctatgacagaaaaattcactgggctgg 372
Query: 61 gggtcagggagaactaggagtcttgacagagataatccactca--ctgtgagtttggctg 118
||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 371 gggtcagggagaactaggagtcttgacggagataatccactcactctgtgagtttggctg 312
Query: 119 tatctttcctggagctcgatcaccacatctatgaagtagatttgtactgagtcatttagg 178
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct: 311 tatctttcctggagctcgatcaccacatctatgaagcagatttgtactgagtcattcagg 252
Query: 179 aatcccttgcttttccttcctcagacacttttaaaaaattatcattttgct 229
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatcccttgcttttccttcctcagacacttttaaaaaattatcattttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 631
Length adjustment: 9
Effective length of query: 220
Effective length of database: 622
Effective search space: 136840
Effective search space used: 136840
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
