Query= MSMg01no268_k16.b1 MSMg01no268_k16.b1 CHROMAT_FILE:
MSMg01no268_k16.b1 PHD_FILE: MSMg01no268_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:59 2005
(317 letters)
>mm_chr16_88141409_88142125
Length = 717
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%)
Strand = Plus / Plus
Query: 5 gaattcacctagaaataaaagctgagcagaaaatcttctcacgttttgttcatatgttat 64
||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 205 gaatttacctagaaataaaaactgagcagaaaatcttctcacgttttgttcatattttat 264
Query: 65 ttttgttgacatctagttatttgtttatttaatatgtatatataaatatacactcatgcc 124
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcgttgacatctagttatttgtttatttaatatgtatatataaatatacactcatgcc 324
Query: 125 tgccatgacacaccttggcatacatataaacacaccacacaaacacgctcaaactctagg 184
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 tgccatgacacactttggcatacatataaacgcaccacacaaacacgctcaaactctagg 384
Query: 185 ctgaaatattcaatgggaacgatcagcaatggatgattaatgatttttaattttaaatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgaaatattcaatgggaacgatcagcaatggatgattaatgatttttaattttaaatct 444
Query: 245 tatgaattatgacacccagtagtgtcataagctttcaatttatttcacaaggtgttatct 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatgaattatgacaccctgtagtgtcataagctttcaatttatttcacaaggtgttatct 504
Query: 305 gttccttttcctg 317
|||||||||||||
Sbjct: 505 gttccttttcctg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_k16.g1 MSMg01no268_k16.g1 CHROMAT_FILE:
MSMg01no268_k16.g1 PHD_FILE: MSMg01no268_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:59 2005
(226 letters)
>mm_chr16_88282398_88283022
Length = 625
Score = 404 bits (209), Expect = e-117
Identities = 221/225 (98%), Gaps = 1/225 (0%)
Strand = Plus / Minus
Query: 1 ctttcttagccaaacagcctaaatatgcctttaaaaatcgatactcaattcccagagccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctttcttagccaaacagcctaaatatgcctttaaaaatcgatactcaattcccagagccg 365
Query: 61 attaagtatttcataattcaaattggaaaaggatggtgaaaatcaggtcttttttttttt 120
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 364 ataaagtatttcataattcaaattggaaaaggatggtgaaaatcaggtc-tttttttttt 306
Query: 121 ttaatgaaaagtcaattgcaacattgaaggttcatcttactgtattctgtgtaatatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttaatgaaaagtcaattgcaacattgaaggttcatcttactgtattctgtgtaatatgta 246
Query: 181 cgaagatattcataggtgtgttgtggggtgtgtgtgtgtgtgtgt 225
|| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 245 cggagatattcataggtgtgttgtggtgtgtgtgtgtgtgtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 625
Length adjustment: 9
Effective length of query: 217
Effective length of database: 616
Effective search space: 133672
Effective search space used: 133672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
