Query= MSMg01no270_j17.b1 MSMg01no270_j17.b1 CHROMAT_FILE:
MSMg01no270_j17.b1 PHD_FILE: MSMg01no270_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:18 2005
(318 letters)
>mm_chr16_95583278_95583995
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 4 ggaattcttcaaagagcgcctgggtcaccctgttttcagggggatgaacgagctactttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcaaagagcgcctgggtcaccctgttttcagggggatgaacgagctactttc 263
Query: 64 cccccattttgtgaggtggaaaaggccattctgtggatggcaataatggcctgccgccat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cccccattttgtgaggtggaaaaggccattctgtggatggcaataatggcctgccgccat 323
Query: 124 ttatattggctgggtaaagtgaaataacagaagtcagatttaggaaacgaacacctacga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatattggctgggtaaagtgaaataacagaagtcagatttaggaaacgaacacctacga 383
Query: 184 gtctatggaaaagcaaatagagagtggaagtaaacactgttgtttctaacataagacctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtctatggaaaagcaaatagagagtggaagtaaacactgttgtttctaacataagacctg 443
Query: 244 gcaggtgctcagatggcagctctgtcaggacttttcctaggacagaattaacctgctcca 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 444 gcgggtgctcagatggcagctctgtcaggacttttcctaggacagaattaacccgctcca 503
Query: 304 aatgaggaagtttg 317
||||||||||||||
Sbjct: 504 aatgaggaagtttg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_j17.g1 MSMg01no270_j17.g1 CHROMAT_FILE:
MSMg01no270_j17.g1 PHD_FILE: MSMg01no270_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:18 2005
(453 letters)
>mm_chr16_95715620_95716473
Length = 854
Score = 683 bits (353), Expect = 0.0
Identities = 417/453 (92%), Gaps = 25/453 (5%)
Strand = Plus / Minus
Query: 1 ccatccttaacaacttcttgcaaactcgttgaaaggagaactgtagaatttaaagactac 60
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 453 ccatccttaacaacttcttgcaaacccgttgaaaggagaactgtagaatttaaagactag 394
Query: 61 aaatga-tttttttcccttggtgacaacactcactgacccaccaggagactggtcagggc 119
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aaatgatttttttttccttggtgacaacactcactgacccaccaggagactggtcagggc 334
Query: 120 aaatccctcaaaggaaaggctgtgcgaaggagctgtccagcaagagagaggcaggcaggc 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 agatccctcaaaggaaaggctgtgcgaaggagctgtccagcaagagagaggcaggcaggc 274
Query: 180 tggaagggctgtgtttgctagtgaattgcaagaagtccttgctgtggtacaagtgtaatt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 273 tggaagggctgtgtttgctagtgaattgcaagaagtccttgctgtggtacaagtgtaagt 214
Query: 240 gtattatttactctgtctgtgtgtctgtgtgtgtctgtgtgcatatgtgaagtccttgct 299
| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 213 ggaatatttactctgtctgtgtgtctgtgtgtgtatgtgtgcatatgtgaagtccttgct 154
Query: 300 gtggtacaagtataaatggagcatttactc------------tgtctgtcta-------- 339
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 153 gtggtacaagtataaatggagcatttactctgtctgtctgtatgtctgtctatgtatctg 94
Query: 340 ----tgtatgtgtgcatgtgtctgtgtgtgtgcttgcatgtttgtgtgtttgtgcatgtt 395
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 93 tatgtgtatgtgtgcatgtgtctgtgtatgtgcttgcatgtttgtgtgtttgtgcatgta 34
Query: 396 tgtgtatgtgtatgtgtgcatgtgtctgtgtgt 428
| |||||||||||||||||||||||||||||||
Sbjct: 33 tctgtatgtgtatgtgtgcatgtgtctgtgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 854
Length adjustment: 10
Effective length of query: 443
Effective length of database: 844
Effective search space: 373892
Effective search space used: 373892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
