Query= MSMg01no271_l22.b1 MSMg01no271_l22.b1 CHROMAT_FILE:
MSMg01no271_l22.b1 PHD_FILE: MSMg01no271_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:41 2005
(259 letters)
>mm_chr16_42007685_42008342
Length = 658
Score = 485 bits (251), Expect = e-142
Identities = 257/259 (99%), Gaps = 1/259 (0%)
Strand = Plus / Plus
Query: 1 tatgagtacatacattctaccaataggtaaacaccggcttggcagtattatcattgctgt 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tatgagtacatacattctaccaataggtaaacaccagcttggcagtattatcattgctgt 260
Query: 61 tataacaaaggcccaaaccatgagcccttaaagctttccggatgaaaggcttacaagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataacaaaggcccaaaccatgagcccttaaagctttccggatgaaaggcttacaagcag 320
Query: 121 aaaacaatctgccctagcgtttgctctgcagacttcaaattacttttcaaccttttctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaacaatctgccctagcgtttgctctgcagacttcaaattacttttcaaccttttctct 380
Query: 181 gtatttatccaactcattgcaaaagatgaaacacctattccaaagtgaggaatgagactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtatttatccaactcattgcaaaagatgaaacacctattccaaagtgaggaatgagactt 440
Query: 241 ctnggggggaatactattt 259
|| ||||||||||||||||
Sbjct: 441 ct-ggggggaatactattt 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 658
Length adjustment: 9
Effective length of query: 250
Effective length of database: 649
Effective search space: 162250
Effective search space used: 162250
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no271_l22.g1 MSMg01no271_l22.g1 CHROMAT_FILE:
MSMg01no271_l22.g1 PHD_FILE: MSMg01no271_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:41 2005
(291 letters)
>mm_chr16_42157551_42158241
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 caccctcattatttcatgctgggctctgacttggcaggtgtgtttcctcccagcggtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 caccctcattatttcatgctgggctctgacttggcaggtgtgtttcctcccagcggtgtg 432
Query: 61 caaggggagatgtaaggcctgtggtttacctctcgttctctccatcaaagtgttcattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 caaggggagatgtaaggcctgtggtttacctctcgttctctccatcaaagtgttcattta 372
Query: 121 atttaatacctacaaataagtcaggatgatgaaagggcatcgtgaggacagagagacttt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 371 atttaatacctacaaataagtcaggatgatgaaaggccatcgtgaggacagagagacttt 312
Query: 181 ataaagaagttgttactgaggttaatttgtatcctgcttctttagacacggctgtctcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ataaagaagttgttactgaggttaatttgtatcctgcttctttagacacggctgtctcct 252
Query: 241 ctccatagatcctatggtgactcgttggggcttgcgtggcagtgacgggtg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ctccatagatcctatggtgactcgttggggcttgcgtggcagtgacgggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
