Query= MSMg01no273_c23.b1 MSMg01no273_c23.b1 CHROMAT_FILE:
MSMg01no273_c23.b1 PHD_FILE: MSMg01no273_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:30 2005
(331 letters)
>mm_chr16_27815668_27816398
Length = 731
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%), Gaps = 2/317 (0%)
Strand = Plus / Minus
Query: 5 gaattctacttctctttcttctttccc-atagttgacagttttgtttttaagtttttcct 63
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 520 gaattctacttctctttcttctttcccaatagttgacagttttgtttttaagtttttcc- 462
Query: 64 tttttttttttttaacccaagcttagacaatatgaacctctgtattgctgactagtgtat 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tttttttttttttaaaccaagcttagacaatatgaacctctgtattgctgactagtgtat 402
Query: 124 tcatcacgaagttggcaatgcaagagctggcttgctataaattcaccttgcaatcttaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcatcacgaagttggcaatgcaagagctggcttgctataaattcaccttgcaatcttaag 342
Query: 184 gtatttgcaaacaaatcttccttttcttttactagttctcattcttccaagggttttcct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtatttgcaaacaaatcttccttttcttttactagttctcattcttccaagggttttcct 282
Query: 244 agttcaaacattctacagaggtcaaggctctgtttcctctaaccttaaccctgatatctg 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 281 agttcaaacattctacagaggtcaaggctctgtttcctttaaccttaaccctgatatctg 222
Query: 304 tgctctaaagacattta 320
|||||||||||||||||
Sbjct: 221 tgctctaaagacattta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_c23.g1 MSMg01no273_c23.g1 CHROMAT_FILE:
MSMg01no273_c23.g1 PHD_FILE: MSMg01no273_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:30 2005
(680 letters)
>mm_chr16_27647869_27648952
Length = 1084
Score = 1152 bits (596), Expect = 0.0
Identities = 661/684 (96%), Gaps = 4/684 (0%)
Strand = Plus / Plus
Query: 1 aaatatccaaaatttccacaggaaaatgacagggacatacaatcacactcaaatcacaga 60
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aaatatacaaaatttccacaggaaaatgacagtgacatacaatcacactcaaatcacaga 260
Query: 61 tagagtttggtgctgtatgtagatcagaaaataccttaaataaaacaattgtacacaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagtttggtgctgtatgtagatcagaaaataccttaaataaaacaattgtacacaaga 320
Query: 121 agtaacctaccaaatatgccacctctaaattcagaacaaattgcagtttatataaaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaacctaccaaatatgccacctctaaattcagaacaaattgcagtttatataaaactc 380
Query: 181 ctaagattctgttaacagattctggaaacaaattatgattttcatcactttatgtgttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 ctaagattctgttaacagattctggaaacaaattatgattttcatcactttatgtattta 440
Query: 241 acctttaatttttcaaaggtaaaatattgcaagagaagaaattgttttgaaattatattt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 441 acctttaatttttcaaaggtaaaatcttgcaagagaagaaattgttttgaaattatactt 500
Query: 301 ttatcacctccaccccaatatctccttatctgcaattacactgaaaagaggattagctat 360
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatcacttccatcccaatatctccttatctgcaattacactgaaaagaggattagctat 560
Query: 361 tttacttaactctt---tatattatgccacatgattgaagc-tcaaaaacgtgtggaaaa 416
|||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 tttacttaactcttctttatattatgccacatgattgaagcctcaaaaacgtgtggaaaa 620
Query: 417 ctggcttgcaattgtgtgcagaacattgaattgatcaaagtacatataccaggtggtaaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggcttgcaattgtgtgcagaacattgaattgatcaaagtacatataccaggtggtaaa 680
Query: 477 atgtttttatacgaagctccccttttgagcaatattaatggcatcattattttctacagc 536
| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 acgtttttctacgaagctccccttttgagcaatattaatggcaccattattttctacagc 740
Query: 537 tatgacagagaactcaagtacctgacttcagatggataaactgataaagaactataacac 596
|||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||
Sbjct: 741 tatgacagagaactcaggtacctgacttcagatggatgaattgataaagaactataacac 800
Query: 597 acgtggtgtgacatagtgcagagtagtttccagtcatactatgctcccgttatttgtgca 656
| ||||| ||||| |||||||||||||||||||||||||||||||||| | | |||||||
Sbjct: 801 atgtggtatgacacagtgcagagtagtttccagtcatactatgctcccatcagttgtgca 860
Query: 657 atattgatgatcacaaaggacata 680
||||||||||||||||||||||||
Sbjct: 861 atattgatgatcacaaaggacata 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1084
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1074
Effective search space: 719580
Effective search space used: 719580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
