Query= MSMg01no273_l17.b1 MSMg01no273_l17.b1 CHROMAT_FILE:
MSMg01no273_l17.b1 PHD_FILE: MSMg01no273_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:09 2005
(685 letters)
>mm_chr16_51334787_51335871
Length = 1085
Score = 727 bits (376), Expect = 0.0
Identities = 396/406 (97%), Gaps = 6/406 (1%)
Strand = Plus / Minus
Query: 286 gttttattaatttttaaataatttctattttttgagaacataatatatattttctccttt 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gttttattaatttttaaataatttctattttttgagaacataatatatattttctccttt 1026
Query: 346 tatttccttcctcctaaccctctgctatcatacacattatacatacatatatatgaaaat 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 tatttccttcctcctaaccctctgctatcatacacattatacatacatatatatgaaaat 966
Query: 406 tttatatacatacatatataaatgataaaacacactcaaagacacacacacacac----- 460
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 tttatatacatacatatataaatgataaaacacactcaaagacacacacacacacataca 906
Query: 461 -acacacacagacacgcacagatatctctcaaaaggaccaaggtctgatcaagtaagtaa 519
||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 905 aacacacacacacatgcacagatacctctcaaaaggaccaaggtctgatcaagtaagtaa 846
Query: 520 atacctgtgtattttactcttgtaagtgtaaaattaattgtgtagttaaacaatggaatt 579
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 845 atacctgtgtattttactcttgtaagtgcaaaattaattgtgtagttaaacaatggaatt 786
Query: 580 tcactacgtttaagaacaatgagacaactaacacactcagttatatgccatatcagaaga 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tcactacgtttaagaacaatgagacaactaacacactcagttatatgccatatcagaaga 726
Query: 640 atttccactctgatattacctacgctaatgacatcgctgcatatgg 685
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 atttccactctgatattacctacgctaatgacatcgctgcatatgg 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space: 725625
Effective search space used: 725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_l17.g1 MSMg01no273_l17.g1 CHROMAT_FILE:
MSMg01no273_l17.g1 PHD_FILE: MSMg01no273_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:09 2005
(291 letters)
>mm_chr16_51229159_51229849
Length = 691
Score = 540 bits (279), Expect = e-158
Identities = 288/291 (98%)
Strand = Plus / Plus
Query: 1 acttctaattactggtacttaaatgtgcagtctctttttaatcacagtttcacacctgtg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 acttctaattactggtacttaaatgtgcagtctctttttaatcacagttttacacctgtg 260
Query: 61 gttaagtgctctgacaaagccttagccttatctctaaggcaggcaaactgcatgactgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttaagtgctctgacaaagccttagccttatctctaaggcaggcaaactgcatgactgaa 320
Query: 121 ttttgtacagaaggctgcatttaccaatgaaaagtgatcatatgcatgtgacacttgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgtacagaaggctgcatttaccaatgaaaagtgatcatatgcatgtgacacttgtaa 380
Query: 181 caataccaaagacgtagttacatttgaaagaatccttctcctggattaggttctcaagta 240
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 caataccaaagacgtagctacatttaaaagaatccttctcctggattaggttctcaagta 440
Query: 241 ctcatcctgatcaacatgtgtatacacacacacacacacacactcactcac 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcatcctgatcaacatgtgtatacacacacacacacacacactcactcac 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
