Query= MSMg01no273_m06.b1 MSMg01no273_m06.b1 CHROMAT_FILE:
MSMg01no273_m06.b1 PHD_FILE: MSMg01no273_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:12 2005
(318 letters)
>mm_chr16_79355979_79356699
Length = 721
Score = 565 bits (292), Expect = e-165
Identities = 306/312 (98%), Gaps = 3/312 (0%)
Strand = Plus / Minus
Query: 8 ttcctattcaatggttgtacca---tttttttcctaagagagagaccaaaattaaatcaa 64
|||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 519 ttcctattcaatggttgtaccaatttttttttcctaagagagaggccaaaattaaatcaa 460
Query: 65 agtaacattctttgtggcttggaaatattagaagaaatgtttgaggacgtaatagtttaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agtaacattctttgtggcttggaaatattagaagaaatgtttgaggacgtaatagtttaa 400
Query: 125 tgtagactttagcttattcatacataaactacaaccaaaaaaagtttttaaaatgcagct 184
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 399 tgtagactttagcttattcatacataaactacaaccaaaaaaagttattaaaatgcagct 340
Query: 185 ccctttatcctaacattccagaataatgctttctagtttttacatgaaatttgttataat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ccctttatcctaacattccagaataatgctttctagtttttacatgaaatttgttataat 280
Query: 245 cctgcccttctgataaaaactgttgcctactattatgcatgctacactccatagctgttt 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 279 cctgcccttctgataaaaactgttgcctactattatgcaggctacactccatagctgttt 220
Query: 305 ccattggctgta 316
||||||||||||
Sbjct: 219 ccattggctgta 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 721
Length adjustment: 9
Effective length of query: 309
Effective length of database: 712
Effective search space: 220008
Effective search space used: 220008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_m06.g1 MSMg01no273_m06.g1 CHROMAT_FILE:
MSMg01no273_m06.g1 PHD_FILE: MSMg01no273_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:12 2005
(639 letters)
>mm_chr16_79328145_79329183
Length = 1039
Score = 1168 bits (604), Expect = 0.0
Identities = 631/640 (98%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 1 ttagtttttaaaatcccttattaaagatcccacgttgatattgcaaaatattttctgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtttttaaaatcccttattaaagatcccacgttgatattgcaaaatattttctgctt 260
Query: 61 agtatatcccatggtattctatttttctaattctagttttgctaattttaattctatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtatatcccatggtattctatttttctaattctagttttgctaattttaattctatttt 320
Query: 121 -ctgtgtatcatccttttaaaaaagcaaaatcatttcaaattttcttttacctttcattc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gttgtgtatcatccttttaaaaaagcaaaatcatttcaaattttcttttacctttcgttc 380
Query: 180 aatcaatgtaattatttttataattatactagcaatatatagttttatttttactctaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaatgtaattatttttataattatactagcaatatatagttttatttttactctaaa 440
Query: 240 tcgcaaaccatagaatatgttttattatatcaatatgattatgctgtcattctattctgt 299
||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 441 tcgcaaaccatagtatatgttttattatatcaatatgattatgctgtcactc-agcctgt 499
Query: 300 ttctgcattttcctctgacatacaggatgaaaatttaaaagcctgataatttgtagcccc 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttctgtattttcctctgacatacaggatgaaaatttaaaagcctgataatttgtagcccc 559
Query: 360 tcatggacatattaaatctttttcctctcttttctttgcaaactattaattcttcatagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcatggacatattaaatctttttcctctcttttctttgcaaactattaattcttcatagt 619
Query: 420 tccatttccatggtattgtcatgctttctaaaagcactgtgggagttttctgtcttccaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tccatttccatggtattgtcatgctttctaaaagcactgtgggagttttctgtcttccaa 679
Query: 480 aatatcatatatttgctgatatattagaaagtttcctgttcaatttctattttgatttca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aatatcatatatttgctgatatattagaaagtttcctgttcaatttctattttgatttca 739
Query: 540 aacattataatctattttgaatgcaccctaatttctcatgataaatttaaaaatggatat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacattataatctattttgaatgcaccctaatttctcatgataaatttaaaaatggatat 799
Query: 600 tataattatacaatcacattatgttattaatattatatat 639
||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tataattatacaatcacattatgttattaatattatatat 839
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
