Query= MSMg01no274_l19.b1 MSMg01no274_l19.b1 CHROMAT_FILE:
MSMg01no274_l19.b1 PHD_FILE: MSMg01no274_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:20 2005
(574 letters)
>mm_chr16_31857644_31858617
Length = 974
Score = 748 bits (387), Expect = 0.0
Identities = 408/415 (98%)
Strand = Plus / Minus
Query: 160 cttgaaccaaccaccagcagcccttcctgcacctgtgtatgagcttttatggtgtttgcc 219
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 974 cttgaaccaaccaccagcagcccttcctgcgcctgtgtatgagctttaatggtgtttgcc 915
Query: 220 tttataagttgctcctgggatggatcccaacataagagagacacctgcaccaatacaaga 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tttataagttgctcctgggatggatcccaacataagagagacacctgcaccaatacaaga 855
Query: 280 aactatttggaataagacttccattttgagtagtggtcgagtaaagtttaagttccaaag 339
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 854 aactatttggaataagacttccactttgagtagtggtcgagtaaagttcaagttccaaag 795
Query: 340 accttcctgggaattcacgtttctcagggacactggtgacttagccaggacaaagcctta 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 accttcctgggaattcacgtttctcagggacactggtgacttagccaggacaaagcctta 735
Query: 400 ggaaaaccgtcccacattttacagatgaacgtgaccatcacattctcagacttgacaacc 459
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 734 ggaaaaccgtcccacattttacagatgaacatgaccatcacattctcagacttgacaacc 675
Query: 460 tgttcttagatgaacttttctaattcactgaaaatctaatatttactcaactaaagcagt 519
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 674 tgttcttagatgaacttttctaattcactgaaaatctaatatttattcaactaaagcagt 615
Query: 520 aacgttaataagctaccaaggctatgtaagctgtattatttttctcaatgcaaat 574
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatgttaataagctaccaaggctatgtaagctgtattatttttctcaatgcaaat 560
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_l19.g1 MSMg01no274_l19.g1 CHROMAT_FILE:
MSMg01no274_l19.g1 PHD_FILE: MSMg01no274_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:20 2005
(327 letters)
>mm_chr16_31631499_31632223
Length = 725
Score = 594 bits (307), Expect = e-174
Identities = 317/321 (98%), Gaps = 2/321 (0%)
Strand = Plus / Plus
Query: 5 aaatgcagagaggcacatccatctttgacggaagtttggtttgaacaagacctaggtgcg 64
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 aaatgcggagaggcacatccatctttgacggaagtttggtttgaacaagacctaggtgcg 264
Query: 65 ggacttggaacagagaggactgagagactgtgcattcttccccttcaaaccacttaaagg 124
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 ggacttggaacagagaggactgagagactg--cattcttccccttcaaaccacttaaagg 322
Query: 125 tgtgttctcttagttttcagctcaacatgttcaaatacaacagtttaattacccttgcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tgtgttctcttagttttcagctcaacatgttcaaatacaacagtttaattacccttgcag 382
Query: 185 catctgtgctttgagatttagggagcaaaagagaagccaaaatcatggaccgttaattca 244
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 383 catctgtgctttgagatttagggagcaaaagagaagccaaaatcatggaccattaattca 442
Query: 245 tgtgaaattaaacctatcaaggtttaagtcttgaacttaaacaatatttttgttttgttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtgaaattaaacctatcaaggtttaagtcttgaacttaaacaatatttttgttttgttg 502
Query: 305 ttgttgttgttgttgttgttg 325
|||||||||||||||||||||
Sbjct: 503 ttgttgttgttgttgttgttg 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 725
Length adjustment: 9
Effective length of query: 318
Effective length of database: 716
Effective search space: 227688
Effective search space used: 227688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
