TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAATATAAATGCTAAGAAGGTATTTGCCTTCTACATGCAGTACCA
ACATTTAGGAGGTATAGATGGTGAACCTGAGCCAGTCTGGGTTCAAATAA
AAGATTCTGATTACACACACACACACACACACACACACACACACACACAC
ACACACCTTCCTTTCTTTCCTCTTACCACATCTCTCTTTTCCAGGTTATT
GTTCCACAGAATGTAACAAAACTCTGGCCTGTCTTTTCCCATTAGTCTTC
ATTTGACTTTATGTCTTTCTAGGGACAATTTCTTTGTTAGTGAGTTTAGT
CATCAAGAACCGAGGATTCTAAGCTCGAGAGAGGAGTCACGGCATTAAGA
GTCCTTGTTAGTCTTGTAGAAGACCCACTACAAGGGTGTTAAATTCCCAG
CACCCACACTACAGTTCAGAACAATACATAACTTCAATTCCAGGAGACAC
AATGTCATCTTCTGACCTCTGTAGTCAGACCACATGGTCTACTAAGGAGA
AAAAAAAAATAAACAATTCCATCACAACCATGTTGACAGTGGTATTTTGA
ATGAGTTGGTGAGAGAAATCCTCCCTCAAAAAAAAAAAAAAAAAAAAAAG
GTGTGTCACTTAAGCAGCGATGGATTGGTGCCAGATGGGAAGGTAAGGGG
TAAGGGTAAGCAGAGACACGGGAATCAAGCTGAAGACAAACTACACTGAA
GAAT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAATTCAACACCTCATTTT
TTTACATTGGGTTATTTAGGTTGTTGGCACCTAGATGTAAGTTTGAAGAA
TATCCTTTTCCAATCTCTGGGCTGTCAATTTATCCTATTGATAGTGTCCT
TTGACTTACAAAAGATTTGCACTATCATAAGGTCCCATTTATCAATTGTT
GATCTTAGAATCTGAGCCACTAAAGATCTGTTCGGGAGCTTGTTTCATAT
ACCAATGCATTAGGCTATTTTCTACTTTCTCTTCTATGAGGTTTAGTGTA
TCAGTTGTTCTTTTTCTTAAGGTCCATGATCTACATGCACTTGAGTTCAG
GGTGGTAACTATAAACCTATTTTCATTCTTCTACATGTAATGACTCAGAC
AGATAAACATACTCACAGTCAAACAGTGGATGGATCTCGAGGACTCTTAT
GGAAGAATAGGAGAAAGAATAGCAGGCCTGAAGAGGATAGGAACTCCACA
AGAAGACCACAGACTAAACTGGACTCTTGGGCCTCTCAGACTCTGAACAA
TCAACCAATAAACATACATGGTCAGGACCTAGGTCATATATATAGCAGAT
GTGCAGATTGACCTTCATGTAGTCCCTGAATAACTGAAACAGGGTCTATT
CCAAGAGTTGTTGCCTGTAAGTGAAATATGTTCTATTAGCTGGGCTGCAT
TGTCTG

Query= MSMg01no276_k04.b1 MSMg01no276_k04.b1 CHROMAT_FILE:
MSMg01no276_k04.b1 PHD_FILE: MSMg01no276_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:37 2005
         (642 letters)



>mm_chr16_79083243_79084284
          Length = 1042

 Score = 1151 bits (595), Expect = 0.0
 Identities = 625/639 (97%), Gaps = 9/639 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaatataaatgctaagaaggtatttgccttctacatgcagtaccaacatttag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaatataaatgctaagaaggtatttgccttctacatgcagtaccaacatttag 263

                                                                       
Query: 64  gaggtatagatggtgaacctgagccagtctgggttcaaataaaagattctgattacacac 123
           |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaggcatagatggtgaacctaagccagtctgggttcaaataaaagattctgattacacac 323

                                                                       
Query: 124 acacacacacacacacacacacacacacacacacacaccttcctttctttcctcttacca 183
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 324 acacacacacacacacacacacacacacacacacac--cttcctttctttcctcttacca 381

                                                                       
Query: 184 catctctcttttccaggttattgttccacagaatgtaacaaaactctggcctgtcttttc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 catctctcttttccaggttattgttccacagaatgtaacaaaactctggcctgtcttttc 441

                                                                       
Query: 244 ccattagtcttcatttgactttatgtctttctagggacaatttctttgttagtgagttta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccattagtcttcatttgactttatgtctttctagggacaatttctttgttagtgagttta 501

                                                                       
Query: 304 gtcatcaagaaccgaggattctaagctcgagagaggagtcacggcattaagagtccttgt 363
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 502 gtcatcaagaaccgaggattctaagctcgagagaggagtcaaggcattaagagtccttgt 561

                                                                       
Query: 364 tagtcttgtagaagacccactacaagggtgttaaattcccagcacccacactacagttca 423
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 562 tagtcttgtagaagacccactacaagggtgttaaattcccagcacccacattacagttca 621

                                                                       
Query: 424 gaacaatacataacttcaattccaggagacacaatgtcatcttctgacctctgtagtcag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaacaatacataacttcaattccaggagacacaatgtcatcttctgacctctgtagtcag 681

                                                                       
Query: 484 accacatggtctactaaggagaaaaaaaaaataaacaattccatcacaaccatgttgaca 543
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 682 accacatggtctactaaggagaaaaaaaaa-taaacaattccatcacaaccatgttgaca 740

                                                                       
Query: 544 gtggtattttgaatgagttggtgagagaaatcctccctcaaaaaaaaaaaaaaaaaaaaa 603
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
Sbjct: 741 gtggtattttgaatgagttggtgagagaaatcctccctcaaaaagaaaaaaaaaa----- 795

                                                  
Query: 604 aggtgtgtcacttaagcagcgatggattggtgccagatg 642
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 796 -ggtgtgtcacttaagcagcgatggattggtgccagatg 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)