Query= MSMg01no276_p14.b1 MSMg01no276_p14.b1 CHROMAT_FILE:
MSMg01no276_p14.b1 PHD_FILE: MSMg01no276_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:00 2005
(368 letters)
>mm_chr16_93876881_93877649
Length = 769
Score = 629 bits (325), Expect = 0.0
Identities = 355/365 (97%), Gaps = 2/365 (0%)
Strand = Plus / Minus
Query: 5 caaaaacaaaaaccctgttattgggtatagcccccaaagactgattgcaaacctaccttt 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 670 caaaaacaaaaaccctgttattgggtatagcccccaaagactgattgcaaacttaccttt 611
Query: 65 ggaagttctaaaacctccccagaggattccaccatgcagccagcactacaggtcccagtg 124
| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 610 gcaag-tctaaaacctccccagaggattccaccatgcagccagcactacgggtcccagtg 552
Query: 125 caggtcacgtttaggtatatccaacaaggccaacaacagctattactgtgggcagcacag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caggtcacgtttaggtatatccaacaaggccaacaacagctattactgtgggcagcacag 492
Query: 185 gactactaccttgatgctgctctgtataacccgactgtgtggttcttgtgtgtgaactcc 244
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 491 gactactaccttgatgctgctctgtataacccaactgtgtggttcttgtgtgtgaacttc 432
Query: 245 atggatgatgtcatgccacagtgtcagaaggttggctgtgtacaaaatgctcaaggacag 304
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 431 atggatgatgtcatgccacagtgtcagaaggctggctgtgtatgaaatgctcaaggacag 372
Query: 305 aagggagctgagatcc-aaaggacacatggatatgcaacaccatttctattctgtgtggt 363
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagggagctgagatccaaaaggacacatggatatgcaacaccatttctattctgtgtggt 312
Query: 364 ctcag 368
|||||
Sbjct: 311 ctcag 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 769
Length adjustment: 9
Effective length of query: 359
Effective length of database: 760
Effective search space: 272840
Effective search space used: 272840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_p14.g1 MSMg01no276_p14.g1 CHROMAT_FILE:
MSMg01no276_p14.g1 PHD_FILE: MSMg01no276_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:01 2005
(290 letters)
>mm_chr16_93747361_93748050
Length = 690
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%)
Strand = Plus / Plus
Query: 5 cccagaccctggagagggtctgcgtgcctcatgtgtgactggtcacctattcctgacttt 64
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 cccagaccctgaagagggtctgcgtgcctcatgtgtgactggtcacatattcctgacttt 264
Query: 65 tcctcaggatggacttcatgggtggtgctcacacagtgcagaaggtgggaagaaacctga 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 265 tcctcaggatggacttcatgggtggtgctcacacggtgcagaaggtgggaagaaacctga 324
Query: 125 aaccttgtcatctttccccaacagaactgacgccctgctcctgagactgtctgtggttgt 184
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaccttgtcatctttcaccaacagaactgacgccctgctcctgagactgtctgtggttgt 384
Query: 185 ggggcgagaggtgttctatgctgccctgtggggcagcgttctgacaagcccttccatccg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggggcgagaggtgttctatgctgccctgtggggcagcgttctgacaagcccttccatccg 444
Query: 245 cctccctgcctccttgtttgtggtgaaccacatcagcagggact 288
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 cctccctgcctccttatttgtggtgaaccacatcagcagggact 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
