Query= MSMg01no279_f01.b1 MSMg01no279_f01.b1 CHROMAT_FILE:
MSMg01no279_f01.b1 PHD_FILE: MSMg01no279_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:52 2005
(636 letters)
>mm_chr16_43972728_43973763
Length = 1036
Score = 1108 bits (573), Expect = 0.0
Identities = 621/641 (96%), Gaps = 10/641 (1%)
Strand = Plus / Plus
Query: 5 gaattctctgttttagcgaaacagaggaaaagaccgataccaattatgctatagtgtt-t 63
|||||||||||| || |||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 197 gaattctctgttcaagagaaacagaggaaaagacctataccaattatgctatagtgttgt 256
Query: 64 ---tgtgtgtgtgtgtgtgtgtgtgtacacttgcgtgtggaaacagagtttgatgctggt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gtgtgtgtgtgtgtgtgtgtgtgtgtacacttgcgtgtggaaacagagtttgatgctggt 316
Query: 121 atcttaatcattttctacagtatgttttattagtcagggtctcttattgaacttgccaac 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 317 atcttaatcattttctacagtatgttttattagtcagggtctcttactgaacttgccaac 376
Query: 181 ttgctaattcagttagatgcaatggccagcaagctcctgtctctgccttcatagtgctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 377 ttgctaattcagttagatgcaatggccagcaagctcctgtctctgccttcacagtgctgg 436
Query: 241 gataacaagcacgtgccactgagcatggccttcttgtgagggtgtagaggagagaactca 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 437 gataacaagcacgtgccactgagcatggccttcctgtgagggtgtagaggagagaactca 496
Query: 301 ggacctcttgcttgcagagcaagcattttaccaacagagccatctccacagttcctgact 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 497 ggacctcttgcttgcagagcaagcattttaccaacagagccatctctacagttcctgact 556
Query: 361 aaatacattttttaaaaccaattaaagggaaattggaagggaaaaaagaaaaagaaagga 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 557 aaatacattttttaaaaccaattaaagggaaattggaagggaaaaa-gaaaaagaaagga 615
Query: 421 aggaaaaaaaaa-----ccctcccaaagtttttctactaatcttcaggaaatgactgaag 475
|||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 616 aggaaaaaaaaaaaaaaccctcccgaagtttttctactaatcttcaggaaatgactgaag 675
Query: 476 gcactaaatctgagagactcacaaacccgatgactaagcgggaacgtcctcacagcctac 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gcactaaatctgagagactcacaaacccgatgactaagcgggaacgtcctcacagcctac 735
Query: 536 aaatatctacaaggtgtaaaactggggaagagacattttaggacaccataaaagaagatc 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 aaatatctacaaggtgtaaaactggggaagagacattttaggacaccataaaagaagatc 795
Query: 596 gaaatggctaggatatggatttagttagtttctgggaatcc 636
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 796 gaaatggctaggatgtggatttagttagtttctgggaatcc 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_f01.g1 MSMg01no279_f01.g1 CHROMAT_FILE:
MSMg01no279_f01.g1 PHD_FILE: MSMg01no279_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:52 2005
(291 letters)
>mm_chr16_44175285_44175975
Length = 691
Score = 495 bits (256), Expect = e-144
Identities = 284/296 (95%), Gaps = 5/296 (1%)
Strand = Plus / Minus
Query: 1 cagggcagccaaagatacacagagaaactctgtctcga-----aaaacaaaacaaaacaa 55
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 669 cagggcagccaaagatacacagagaaactctgtctcgaaaaacaaaacaaaacaaaacaa 610
Query: 56 aacaaaatttgttgttggcttggtaagatggttcaccaagtacttgctgccaagcctgcc 115
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 609 aacaaaatttgttgttggcttggtaagatggctcaccaagtacttgctgccaagcctgcc 550
Query: 116 aagttgagtctaatcccacacagcagaaaactgtctctcaagttgtcctctgacccccca 175
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 549 aagttgagtccaatcccacacagcagaaaactgtctctcaagttgtcctctgaccccgca 490
Query: 176 tctatatactgcaaatgcagacccaccccccctctcaataatgtaatttaaaaaatctaa 235
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 489 tctatatactgcaaatgcagacccaccccccctctcaataatgtaatttttaaaatctaa 430
Query: 236 aactattgttggtgtgaggtatgagggcacacatctgtaattccagcacttaggag 291
||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 429 aactattcttggtgtgaggtatgagggcacacatctgtaattccagcacttgggag 374
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
