CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTCCTTTCTTTGCTTTCTGTTCTATTCCAACCCTCAATACAGTTAA
GGACCCGTGACCAATAAGGGGAGGATCCTAACTCTATCTGGAAACATCTT
TGCATACCACTAGTTAAATAGTATTTAATCTGAGTATTCTGTCTGTCAAG
TTGATACGTAATCTTAACCACTATACTTACCATGCAGCTAGAGAATTCTG
CATCACCTTCACCAGTGTTAGCACTCAGAGGTAGGGAAACTGGCGTCTGC
CTTAGCTGCATACATGTGTTGGGAATATTACTGTCTTCTTTATTTTGAAG
TATATATTTTATTTTATATATTTTTATTTTTAATATTAATATTTTCAGTT
TTCTAGATGATCTTAGTCAATATTCTACTGCTGAGAAGACACAACATGAC
CATGACAATTGTTTCTTTCTTTCTTTTTTAAATCCTTTCATATCCTGGCT
TCCTTTAACCCTCCTTCTCCCCCAGCCCCCCTATCTCCCCTCAGAAAAGA
ACATACTTCTCAGGGACTTTAACAAAATATGCTGTAATAAACTACAATAA
GAGAAGGCACATACTTCTGGGTTTTGGTCTGTTGCTATGTATTCAAATGT
TTAATTTTGTATCCCAAGATCTGGTTGCCCCAAGACAAGAAGATTCTTAT
GTGCACAAGCATTTGTTGTATAAATN

NCCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCCCNAATTCTCACCTCAAAGTATTTATTACAA
ATAATAAGAGGCAGCTCCCTTTTATCCCCCCACACGGCGGCATGCGGCAT
CGGGCGAGGAGTTATGTCCACCCCCCCCCCCCCNCCCCCCCCCCCCCCCC
NTCCCTCCCCCCCCCCCCCCCCCCCCCCNTTCCCCNCCCCCCCTCCCCCC
CCTCCCCCCCCCCCCCCCCCCCNCTCCCCCNCCCCCCCCTTCCCCCCCCC
CCTCTCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCTTTCCCCCTTTCCC
CCCCCCCCCCCCNTCTNCCCCNCCCCCTCTTTCTTTCCCCCCCCCCCCCC
CCCCCCCCTNCCCCTCCCCCCCCCTTCCCCCCCTCCTCCCCCCCCCCCTC
CCCCCTCACCTCCCTCCTCCCCCTCCCCCCCTCCCCCCCCCCCCCTTTCC
CCCCCTCCCCCCCCCCTCTTTTCCCCCCCCCCCCCCCCCTTCTTTTTCCC
CCCCCCCTCCCTCCCCCCCCCCTCTTTTCCCCCTTCCCCCCCCCCCATCC
CCCCCTCCTCTCCTCCCTCCTTCCCCCCCCCCCCTCTTCCCTCTTCTTTT
TCCCCCCCCCCCCCCTTCTCCCCCCCCCCTNTTTTATCTCCNCCTCCATC
CCCCCCCNTNATTTTCTCCCCCCCTCCCTCCCCCTCTCCTTTTTTCCCCC
CCTTTTNTNCNCCNCCCCCTCTTCCCCCCCCCCCTTTTCCCCCCTCTCTC
TCCTTCTCCCCCCCCCCCCCCCCCCACCCTTCCCTCTTCTTCCCTCCCCC
CCCCTCCTCCTTTCCCCCCCCTCCCCCCTGCGCTCTCCCCGTTACCCTA

Query= MSMg01no280_a03.b1 MSMg01no280_a03.b1 CHROMAT_FILE:
MSMg01no280_a03.b1 PHD_FILE: MSMg01no280_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:45 2005
         (638 letters)



>mm_chr16_26754335_26755372
          Length = 1038

 Score =  922 bits (477), Expect = 0.0
 Identities = 611/693 (88%), Gaps = 62/693 (8%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctcctttctttgctttctgttctattccaaccctcaatacagttaaggacccgt 64
           ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 205 gaattccttttttctttgctttctgttctattccaacactcaatacagttaaggacctgt 264

                                                                       
Query: 65  gaccaataaggggaggatcctaactctatctggaaacatctttgcataccactagttaaa 124
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 265 gaccaataaggggaggatcctaactctatctggaaacatctttgcatacccctaattaaa 324

                                                                       
Query: 125 tagtatttaatctgagtattctgtctgtcaagttgatacgtaatcttaaccactatactt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagtatttaatctgagtattctgtctgtcaagttgatacgtaatcttaaccactatactt 384

                                                                       
Query: 185 accatgcagctagagaattctgcatcaccttcaccagtgttagcactcaga-ggtaggga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |
Sbjct: 385 accatgcagctagagaattctgcatcaccttcaccagtgttagcactcagacgg-aggaa 443

                                                                       
Query: 244 aactggcgtctgccttagctgcatacatgtgttgggaatattactgtcttctttattttg 303
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aactggtgtctgccttagctgcatacatgtgttgggaatattactgtcttctttattttg 503

                                                                       
Query: 304 aagtatatat--tttattttatatatttttatttttaatattaatattttcagttttcta 361
           ||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 504 aagtatatatattttattttatatatttttatttttaatattaatactttcagttttcga 563

                                                                       
Query: 362 gatgatcttagtcaatattctactgctgagaagacacaacatgaccatgacaattgtttc 421
            |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||
Sbjct: 564 aatgatcttagtcaatattctaccgctaagaagacacaacatgaccatgacaattctttc 623

                                                                       
Query: 422 t------ttctttcttt-ttt--------------------------------------- 435
           |      |||||||||| |||                                       
Sbjct: 624 tctctctttctttctttctttctttctttctttctttctttctttctttctttctttctt 683

                                                                       
Query: 436 ------------aaatcctttcatatcctggcttcctttaaccctccttctcccccagcc 483
                       |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 684 tctttctttcttaaatcctttcatatcctggcttccattaaccctccttctcccccagcc 743

                                                                       
Query: 484 cccctatctcccctcagaaaagaacatacttctcagggactttaacaaaatatgctgtaa 543
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctcctatctcccctcagaaaagaacatacttctcagggactttaacaaaatatgctgtaa 803

                                                                       
Query: 544 taaactacaataagagaaggcacatacttctgggttttggtctgttgctatgtattcaaa 603
           ||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 804 taaactacaataagacaaggcacatactgctgggttttggtctgttgctctgtattcaaa 863

                                            
Query: 604 tgtttaattttgtatcccaagatctggttgccc 636
           ||||||||| |||||||||||||||||||||||
Sbjct: 864 tgtttaattctgtatcccaagatctggttgccc 896


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)