Query= MSMg01no280_c15.b1 MSMg01no280_c15.b1 CHROMAT_FILE:
MSMg01no280_c15.b1 PHD_FILE: MSMg01no280_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:56 2005
(700 letters)
>mm_chr16_24738731_24739830
Length = 1100
Score = 1253 bits (648), Expect = 0.0
Identities = 674/683 (98%), Gaps = 1/683 (0%)
Strand = Plus / Minus
Query: 5 gaattcccaaagcatttccattctgctgaaggacattggcttgtcttccctttatgggag 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaattcccaaagcagttccattctgctgaaggacattggcttgtcttccctttatgggag 623
Query: 65 cttaggggcagtgcagacagagttgagagaaaatcctcccccacctcttcacagtgagtg 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 622 cttaggggcagtgcagacagagttgagagaaaatcctccctcacctcttcacagtgagtg 563
Query: 125 aatgcactcagttctcaaggggctggctgggagcaaccttcagaatgaggggtgcaggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aatgcactcagttctcaaggggctggctgggagcaaccttcagaatgaggggtgcaggga 503
Query: 185 gtggggaaggaaggcagcctgacacagcccgattacaatggcctgctgagaagcagaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtggggaaggaaggcagcctgacacagcccgattacaatggcctgctgagaagcagaaag 443
Query: 245 ctctgggggcaacagagcaaatgcatgttaagaacccagaggaactcatcttaaatctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctctgggggcaacagagcaaatgcatgttaagaacccagaggaactcatcttaaatctca 383
Query: 305 gaccctttataaaaccagaggccaagcatgagcatggagacagatgcctatagtaccaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gaccctttataaaaccagaggccaagcatgagcatggagacagatgcctatagtaccaca 323
Query: 365 gagtctgaaggaaaagaacagagcggccaagcctaggagttcttggctagcatggcaaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagtctgaaggaaaagaacagagcggccaagcctaggagttcttggctagcatggcaaca 263
Query: 425 tagcccaactttaaaacaaacaaaacagcccaaggcaaaaaggctctgtgctaggttctt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tagcccaactttaaaacaaacaaaacagcccaaggcaaaaaggctctgtgctaggttctt 203
Query: 485 tttattatctttttttttaaattatctttttaagttggaggtaaattaatggagtatcca 544
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tttattatcttttttttt-aattatctttttaagttggaggtaaattaatggagtatcca 144
Query: 545 gtaaaagactaagcaattgtttgctcgtcctcacaggaaaagtgacttttaaaacaaaat 604
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 143 gtaaaagactaagcaattgtttgctagtcctcacaggaaaagtgacttttaaaacaaaat 84
Query: 605 tatgaagaanaagttttaatgctctaagaaggtatactgcatttcagttatattagccac 664
||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 83 tatgaagaaaaaaatttaatgctctaagaaggtatactgcatttcagttatattaaccac 24
Query: 665 ttagttatgtccaagttatatgt 687
||| |||||||||||||||||||
Sbjct: 23 ttacttatgtccaagttatatgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_c15.g1 MSMg01no280_c15.g1 CHROMAT_FILE:
MSMg01no280_c15.g1 PHD_FILE: MSMg01no280_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:56 2005
(310 letters)
>mm_chr16_24624427_24625136
Length = 710
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 1 agagaagtaataagagtgtctcttagcaaccaaccccaggagaaagagaaaattactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagaagtaataagagtgtctcttagcaaccaaccccaggagaaagagaaaattactcaa 260
Query: 61 actgagccattcagctagggaagtagaaagaaaaatattctgaaagtctgaaaatgctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgagccattcagctagggaagtagaaagaaaaatattctgaaagtctgaaaatgctca 320
Query: 121 agttcagtcttcaatgtagcagacagaggtggcaggctggggtgggtgtgttagtaacaa 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcagtcttcaatgccgcagacagaggtggcaggctggggtgggtgtgttagtaacaa 380
Query: 181 aaatctgtgagaaattgaaatgttctctctttcgctttccttctgtttcctgccacctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatctgtgagaaattgaaatgttctctctttcgctttccttctgtttcctgccacctca 440
Query: 241 ccctataagatacaggagtaagaaagggtgagccaaagaaggctaaaaagtccttctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctataagatacaggagtaagaaagggtgagccaaagaaggctaaaaagtccttctttc 500
Query: 301 ccactatagg 310
||||||||||
Sbjct: 501 ccactatagg 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
