Query= MSMg01no280_m19.b1 MSMg01no280_m19.b1 CHROMAT_FILE:
MSMg01no280_m19.b1 PHD_FILE: MSMg01no280_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:43 2005
(622 letters)
>mm_chr16_79355869_79356890
Length = 1022
Score = 1122 bits (580), Expect = 0.0
Identities = 598/604 (99%)
Strand = Plus / Minus
Query: 5 tttttttcctaagagagagaccaaaattaaatcaaagtaacattctttgtgccttggaaa 64
||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 604 tttttttcctaagagagaggccaaaattaaatcaaagtaacattctttgtggcttggaaa 545
Query: 65 tattagaagaaatgtttgaggacgtaatagtttaatgtagactttagcttattcatacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tattagaagaaatgtttgaggacgtaatagtttaatgtagactttagcttattcatacat 485
Query: 125 aaactacaaccaaaaaaagtttttaaaatgcagctccctttatcctaacattccagaata 184
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aaactacaaccaaaaaaagttattaaaatgcagctccctttatcctaacattccagaata 425
Query: 185 atgctttctagtttttacatgaaatttgttataatcctgcccttctgataaaaactgttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atgctttctagtttttacatgaaatttgttataatcctgcccttctgataaaaactgttg 365
Query: 245 cctactattatgtttgctacactccatagctgtttccattggctgtagtcttttgtcata 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cctactattatgcaggctacactccatagctgtttccattggctgtagtcttttgtcata 305
Query: 305 cttcctattttttctaggtctgttttgaagctgcaagctgaacttgggtatttgttagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cttcctattttttctaggtctgttttgaagctgcaagctgaacttgggtatttgttagag 245
Query: 365 cattttcatccctataatctccttaggtgtgaaccttaaatcttaaggccttgatgatgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 cattttcatccctataatctccttaggtgtgaaccttaaatcttaaggccttgatgatgc 185
Query: 425 ctatgcacattaaagagaacggtgtgctgtattccaaatgcactgaccttcagtgttaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctatgcacattaaagagaacggtgtgctgtattccaaatgcactgaccttcagtgttaat 125
Query: 485 ttctacagatagcaacaggcttatgattgggccaacccaagttaagctgacacaggaagt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttctacagatagcaacaggcttatgattgggccaacccaagttaagctgacacaggaagt 65
Query: 545 gattgacagcacttataaaatactcaccaaccaaagagtacacatggagggactcatggt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gattgacagcacttataaaatactcaccaaccaaagagtacacatggagggactcatggt 5
Query: 605 tcta 608
||||
Sbjct: 4 tcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_m19.g1 MSMg01no280_m19.g1 CHROMAT_FILE:
MSMg01no280_m19.g1 PHD_FILE: MSMg01no280_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:43 2005
(663 letters)
>mm_chr16_79328145_79329208
Length = 1064
Score = 1245 bits (644), Expect = 0.0
Identities = 659/664 (99%), Gaps = 1/664 (0%)
Strand = Plus / Plus
Query: 1 ttagtttttaaaatcccttattaaagatcccacgttgatattgcaaaatattttctgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagtttttaaaatcccttattaaagatcccacgttgatattgcaaaatattttctgctt 260
Query: 61 agtatatcccatggtattctatttttctaattctagttttgctaattttaattctatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtatatcccatggtattctatttttctaattctagttttgctaattttaattctatttt 320
Query: 121 -ctgtgtatcatccttttaaaaaagcaaaatcatttcaaattttcttttacctttcattc 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gttgtgtatcatccttttaaaaaagcaaaatcatttcaaattttcttttacctttcgttc 380
Query: 180 aatcaatgtaattatttttataattatactagcaatatatagttttatttttactctaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaatgtaattatttttataattatactagcaatatatagttttatttttactctaaa 440
Query: 240 tcgcaaaccatagaatatgttttattatatcaatatgattatgctgtcacccagcctgtt 299
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tcgcaaaccatagtatatgttttattatatcaatatgattatgctgtcactcagcctgtt 500
Query: 300 tctgtattttcctctgacatacaggatgaaaatttaaaagcctgataatttgtagcccct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgtattttcctctgacatacaggatgaaaatttaaaagcctgataatttgtagcccct 560
Query: 360 catggacatattaaatctttttcctctcttttctttgcaaactattaattcttcatagtt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catggacatattaaatctttttcctctcttttctttgcaaactattaattcttcatagtt 620
Query: 420 ccatttccatggtattgtcatgctttctaaaagcactgtgggagttttctgtcttccaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccatttccatggtattgtcatgctttctaaaagcactgtgggagttttctgtcttccaaa 680
Query: 480 atatcatatatttgctgatatattagaaagtttcctgttcaatttctattttgatttcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatcatatatttgctgatatattagaaagtttcctgttcaatttctattttgatttcaa 740
Query: 540 acattataatctattttgaatgcaccctaatttctcatgataaatttaaaaatggatatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acattataatctattttgaatgcaccctaatttctcatgataaatttaaaaatggatatt 800
Query: 600 ataattatacaatcacattatgttattaatattatatatgtgtgtatattttacaaaatc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ataattatacaatcacattatgttattaatattatatatgtgtgtatattttacaaaatc 860
Query: 660 acat 663
||||
Sbjct: 861 acat 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1064
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1054
Effective search space: 688262
Effective search space used: 688262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
