Query= MSMg01no288_k11.b1 MSMg01no288_k11.b1 CHROMAT_FILE:
MSMg01no288_k11.b1 PHD_FILE: MSMg01no288_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:47 2005
(369 letters)
>mm_chr16_18388490_18389258
Length = 769
Score = 648 bits (335), Expect = 0.0
Identities = 356/363 (98%)
Strand = Plus / Plus
Query: 5 gaattcctagtcctcccccagtctttctaggagctccaaggtagtggtcctcacccaccc 64
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagtccacagccagtctttctaggagctccaaggtagtggtcctcacccaccc 264
Query: 65 accagccttggtgcccagcctctcatgccctgcctgctggctgctttgacttggccatac 124
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accagccttgatgtccagcctctcatgccctgcctgctggctgctttgacttggccatac 324
Query: 125 tggctttgtggctgctgctggaccctcactctctgtgggtctctgttggacaggattaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 tggctttgtggctgctgctggaccctcactctctgtgggtctctgttggacaggattgag 384
Query: 185 gtggtcccatgagactggaatcagctggcagaatcaggggcaaccagaagccaggaagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtggtcccatgagactggaatcagctggcagaatcaggggcaaccagaagccaggaagat 444
Query: 245 agagaatatttatcagatcacatcccccctcccaccaggctctgagaaacccctggtcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agagaatatttatcagatcacatcccccctcccaccaggctctgagaaacccctggtcta 504
Query: 305 cggctcagctgtgcttggcaggaagcaaagagcctgggtcagaggcccagcttcgcgggg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggctcagctgtgcttggcaggaagcaaagagcctgggtcagaggcccagcttcgcgggg 564
Query: 365 agg 367
|||
Sbjct: 565 agg 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_k11.g1 MSMg01no288_k11.g1 CHROMAT_FILE:
MSMg01no288_k11.g1 PHD_FILE: MSMg01no288_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:22:47 2005
(358 letters)
>mm_chr16_18553644_18554406
Length = 763
Score = 574 bits (297), Expect = e-168
Identities = 331/349 (94%), Gaps = 13/349 (3%)
Strand = Plus / Minus
Query: 1 taaccaatccctttcccagaatggcctcatga----ccccgccctgatttgtaccctggg 56
|||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 545 taaccaatccctttcccagaatggcctcatgataag----gccctgatttgtaccctggg 490
Query: 57 tttagtgacgcccttatgaccctgggtgccatctggcatcaaccaagccctacctttacc 116
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 489 tttagtgacgcccttatgaccctgggtgccatccggcatcaaccaagccctacctttacc 430
Query: 117 cacccacccacatgcctcaggaaggatgggtggacagacataaaggacagtctgcctgtg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cacccacccacatgcctcaggaaggatgggtggacagacataaaggacagtctgcctgtg 370
Query: 177 tggacaggatactctgaatccattgtgcccagcacaattggacccccccc-----cacca 231
|||||| ||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 369 tggacaagatactctgaatccattgtgcccagcaaaattggaccccccccacccccccca 310
Query: 232 cggacagtcctggctcagagtctgccttaccagtgggcctcagtgcccaccttcctttcc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cggacagtcctggctcagagtctgccttaccagtgggcctcagtgcccaccttcctttcc 250
Query: 292 tgggaagagcctttactgcccaccttcctttcttgggaagagcctttac 340
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 249 tgggaagagcctttactgtccaccttcctttcttgggaagagcctttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 763
Length adjustment: 9
Effective length of query: 349
Effective length of database: 754
Effective search space: 263146
Effective search space used: 263146
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
