Query= MSMg01no288_o02.b1 MSMg01no288_o02.b1 CHROMAT_FILE:
MSMg01no288_o02.b1 PHD_FILE: MSMg01no288_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:04 2005
(313 letters)
>mm_chr16_18225713_18226424
Length = 712
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatccttagtcattctgtgaggcccacgggagccctcagaagaattggaggtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggaattccatccttagtcattctgtgaggcccacgggagccctcagaagaattggaggtt 453
Query: 64 tgtttgagaaagcacgtttattttcacgagttaagtacttctttgtctatcactatggaa 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 452 tgtttgagaaagcacgtttattttcacgagttaagtacttctttgtctatcactgtggaa 393
Query: 124 cagtcagcaacatggagcagcagcctgtggaatgatccagaactcttgagtgttcccaaa 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 392 cagtcagcaacatggagcagcagcctgtggaatgatccagaactc-tgagtgttcccaaa 334
Query: 184 gctgctctccttctagaggttgcctgagagactagttccacacacccagaccagctctgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gctgctctccttctagaggttgcctgagagactagttccacacacccagaccagctctgt 274
Query: 244 cctggggacctccttactgtaggccattgggtgtgagagagcctgggcaccgcctgacaa 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 273 cctggggacctccttactgtaggccattgggtgagagagagcctgggcaccgcctgacaa 214
Query: 304 gggtccaatc 313
||||||||||
Sbjct: 213 gggtccaatc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 712
Length adjustment: 9
Effective length of query: 304
Effective length of database: 703
Effective search space: 213712
Effective search space used: 213712
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no288_o02.g1 MSMg01no288_o02.g1 CHROMAT_FILE:
MSMg01no288_o02.g1 PHD_FILE: MSMg01no288_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:23:04 2005
(285 letters)
>mm_chr16_18053908_18054592
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 cagaattctatgtgactgactacttgtgaccacctggttggaggtctctaggttatgtgc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaattctatgtgactggctacttgtgaccacctggttggaggtctctaggttatgtgc 260
Query: 61 tctgaggcaggcacagaaatagggagggcgttagccctactccgaccagtcccagaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgaggcaggcacagaaatagggagggcgttagccctactccgaccagtcccagaatga 320
Query: 121 gattctaatctgaatttttagattcccagggcttggacatagtctacctcaccgttccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattctaatctgaatttttagattcccagggcttggacatagtctacctcaccgttccat 380
Query: 181 gccaattcttctggtggcatggtccacgtgccctacaagaatcaggaaagcaaggctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccaattcttctggtggcatggtccacgtgccctacaagaatcaggaaagcaaggctctc 440
Query: 241 agtctctctgtgggctgtacttgtggtttaagagtttattttggt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtctctctgtgggctgtacttgtggtttaagagtttattttggt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
