Query= MSMg01no292_h21.b1 MSMg01no292_h21.b1 CHROMAT_FILE:
MSMg01no292_h21.b1 PHD_FILE: MSMg01no292_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:34 2005
(320 letters)
>mm_chr16_43704095_43704814
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 312/315 (99%)
Strand = Plus / Plus
Query: 5 gaattccacagacaggcaacagctataaggacagccctgctccacttgttggggaccagg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacagacaggcaacagctataaggacagccctgctccacttgttggggaccagg 264
Query: 65 aagactgagctgcacatctgctacccaagtccagcctgttaatgctctttgcataaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagactgagctgcacatctgctacccaagtccagcctgttaatgctctttgcataaatga 324
Query: 125 ctcttgtgccgttttctggaaatgtgcatcctcacttgcacttctctaaaacacctcaaa 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcttgtgccattttctggaaatgtgcatcctcacttgcacttctctaaaacacctcaaa 384
Query: 185 tcccaaatctttgctaaatgcatatacaagcagacccttccctccattacagccactcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcccaaatctttgctaaatgcatatacaagcagacccttccctccattacagccactcag 444
Query: 245 tgctctgctgctggtatctctgtctgctcanctggccctgtgcctttctctgctctatca 304
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct: 445 tgctctgctgctggtatctctgtctgctcagctggccctctgcctttctctgctctatca 504
Query: 305 tttatgactctaaag 319
|||||||||||||||
Sbjct: 505 tttatgactctaaag 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_h21.g1 MSMg01no292_h21.g1 CHROMAT_FILE:
MSMg01no292_h21.g1 PHD_FILE: MSMg01no292_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:34 2005
(285 letters)
>mm_chr16_43875207_43875893
Length = 687
Score = 491 bits (254), Expect = e-143
Identities = 276/286 (96%), Gaps = 6/286 (2%)
Strand = Plus / Minus
Query: 1 agtgattctccacttcacctcccacggtctacgtgcctggcatgcccctgctcatcatag 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 484 agtgattctccacttcacctcccacggtctacgtgcctggcatgcccccgctcatcatag 425
Query: 61 actgccttttcccacgaccagcagtctggcctttctgagttattttgcagctctttaaag 120
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 424 actgccttttcccacgacgagcagtctggcctttctgaattattttgcagctctttaaag 365
Query: 121 cattcatttgtttaattttgggccacctatacccagatactttttttttttctggatttt 180
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 364 cattcatttgtttaattttgggccacctatacccaaatacttttttttt--ctggatttt 307
Query: 181 tttttttt----aatttccaggcatttttcctctctcgcttctattaggtttgtttcact 236
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttttttttttttaatttccaggcatttttcctctctcgcttctattaggtttgtttcact 247
Query: 237 tactcatctctttatgaaacagtccctgacacttctggaaactccc 282
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tactcatctctttatgaaacagtccctgacacttctggaaactccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 687
Length adjustment: 9
Effective length of query: 276
Effective length of database: 678
Effective search space: 187128
Effective search space used: 187128
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
