Query= MSMg01no292_j24.b1 MSMg01no292_j24.b1 CHROMAT_FILE:
MSMg01no292_j24.b1 PHD_FILE: MSMg01no292_j24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:44 2005
(663 letters)
>mm_chr16_95797707_95798771
Length = 1065
Score = 1197 bits (619), Expect = 0.0
Identities = 650/661 (98%), Gaps = 2/661 (0%)
Strand = Plus / Minus
Query: 5 gaattcactttccagaccgtgtgatcttacagtgtggtaacggcaactacaagggaaatc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 gaattcactttccagacggtgtgatcttacagtgtggtaacggcaactacaagggaaatc 806
Query: 65 ggatcttcctaaaccaaagtgcacagctggatgtcacagagctaac--gggctgcacact 122
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 805 ggatcttcctaaaccaaagtgcacagctggatgttacagagctaacaggggctgcacact 746
Query: 123 gctctttgtgactgcctgtgtcccttctgtgacatgtgtcccttctgtgacatgtgtcat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctctttgtgactgcctgtgtcccttctgtgacatgtgtcccttctgtgacatgtgtcat 686
Query: 183 tgattagctcacctgtcaaactatgcttgctttagagccaaagcctccttgaatctttat 242
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 685 tgattagctcacctgtcaaactatgcttgctttagagccaacgcctccttgagtctttat 626
Query: 243 gcagaggcaaggcttcacgagcaggtttgtgctcacccctacttccttgagtaagaagct 302
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 625 gcagaggcaaggcttcacgagcaggtttacgctcacccctacttccttgagtaagaagct 566
Query: 303 tgcgttcagctctggatcctgcagtggagtcagtcttagcccgtggctccctgtaggtgt 362
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 tgcgttcagctctggatcctgcagtggagtcagtcttagcccatggctccctgtaggtgt 506
Query: 363 gtgttcctgttgatgccagtgcatattaaggggatttcattctcttgctttggtttacta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgttcctgttgatgccagtgcatattaaggggatttcattctcttgctttggtttacta 446
Query: 423 ttccctgcaggcgtgcataccataaaagaaccattaaaaaagatctgttaaacaaaatat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttccctgcaggcgtgcataccataaaagaaccattaaaaaagatctgttaaacaaaatat 386
Query: 483 gcaaggcttctctcaactctaatcgctgtatcagattttatacctcattcaggcggttgc 542
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcaaggcttctctcaactccaatcgctgtatcagattttatacctcattcaggcggttgc 326
Query: 543 tggtggccagacattaatggagaggaatatctcttggatttttaaacaaagggaactgcc 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtggccagacattaatggagaggaatatctcttggatttttaaacaaagggaactgcc 266
Query: 603 aaagttctacccactgtcaaatgtctctttctagctgggatgcttcattgccaatcacgt 662
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagttctacccactgtcaaatatctctttctagctgggatgcttcattgccaatcacgt 206
Query: 663 a 663
|
Sbjct: 205 a 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1065
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1055
Effective search space: 688915
Effective search space used: 688915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_j24.g1 MSMg01no292_j24.g1 CHROMAT_FILE:
MSMg01no292_j24.g1 PHD_FILE: MSMg01no292_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:44 2005
(174 letters)
>mm_chr16_95607963_95608536
Length = 574
Score = 298 bits (154), Expect = 1e-85
Identities = 166/170 (97%)
Strand = Plus / Plus
Query: 1 agtctctcgggagcctctgtccactaggatggaacttgggtaatgcttcaaattcgcaga 60
|||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 201 agtctctcgggagcctttgtccactaggatggaacttgggtaatgcttaaaatgcgcaga 260
Query: 61 gcaagggaagatcgcgggtgtggccactaggtcgctgagatgctgatatcaaagggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaagggaagatcgcgggtgtggccactaggtcgctgagatgctgatatcaaagggtttg 320
Query: 121 agatgattgttaaattaaaacaaaaacaagaacaaaaaaacaaaaactaa 170
||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 agatgattgttaaattaaaacaaaaacaaaaacaaaaaaacaaaaactaa 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
