MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-293I04
Chromosome	16 (Build37)
Map Location	13,224,370 - 13,224,634
singlet/doublet	singlet
Overlap gene	none
Upstream gene	2700045P11Rik, EG622509, LOC622553, Ercc4
Downstream gene	Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1, Pdxdc1, Mpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11
Link	Open Mouse BAC browser

Click to get alignment info.

name	2700045P11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72555 MGI:1919805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein

name	EG622509 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622509 MGI:3646646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 81 Proteins

name	LOC622553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ercc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50505 MGI:1354163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gt4-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107459 MGI:107691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mkl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239719 MGI:3050795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Parn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74108 MGI:1921358
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043196 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs

name	3110001I22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66598 MGI:1913848
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pla2g10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26565 MGI:1347522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930007A09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432999 MGI:3045309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs

name	LOC622757 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins

name	Rrn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106298 MGI:1925255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ntan1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18203 MGI:108471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdxdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94184 MGI:1920909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mpv17l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93734 MGI:2135951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ifitm7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74482 MGI:1921732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900011O08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67254 MGI:1914504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4921513D23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223989 MGI:2444505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nde1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67203 MGI:1914453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myh11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17880 MGI:102643
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2700045P11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267278 GeneID:72555 MGI:1919805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein product : RIKEN cDNA 2700045P11 gene, transcript variant 2 transcript_id : XM_980313.2

name	EG622509 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267280 GeneID:622509 MGI:3646646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 81 Proteins product : predicted gene, EG622509 transcript_id : XM_886942.2

name	Ercc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657063 GeneID:50505 MGI:1354163
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : excision repair cross-complementing rodent repair deficiency, complementation group 4 transcript_id : NM_015769.1

name	Gt4-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32469512 GeneID:107459 MGI:107691
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene trap insertion site 4-1 transcript_id : NM_181860.1

name	Mkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956387 GeneID:239719 MGI:3050795
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MKL/myocardin-like 2 transcript_id : NM_153588.1

name	Parn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803094 GeneID:74108 MGI:1921358
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : poly(A)-specific ribonuclease (deadenylation nuclease) transcript_id : NM_028761.2

name	LOC100043196 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267367 GeneID:100043196
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs product : hypothetical protein LOC100043196 transcript_id : XM_001480276.1

name	3110001I22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358124 GeneID:66598 MGI:1913848
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3110001I22 gene transcript_id : NM_025653.2

name	Pla2g10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129973 GeneID:26565 MGI:1347522
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, group X transcript_id : NM_011987.2

name	A930007A09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94400071 GeneID:432999 MGI:3045309
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 24 ESTs product : RIKEN cDNA A930007A09 gene transcript_id : XM_484524.3

name	Rrn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299629 GeneID:106298 MGI:1925255
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RRN3 RNA polymerase I transcription factor homolog (yeast) transcript_id : NM_001039521.1

name	Ntan1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87299633 GeneID:18203 MGI:108471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-terminal Asn amidase transcript_id : NM_010946.3

name	Pdxdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88758583 GeneID:94184 MGI:1920909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyridoxal-dependent decarboxylase domain containing 1 transcript_id : NM_001039533.1

name	Pdxdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88758581 GeneID:94184 MGI:1920909
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pyridoxal-dependent decarboxylase domain containing 1 transcript_id : NM_053181.2

name	Mpv17l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802470 GeneID:93734 MGI:2135951
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Mpv17 transgene, kidney disease mutant-like transcript_id : NM_033564.2

name	Ifitm7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21539642 GeneID:74482 MGI:1921732
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon induced transmembrane protein 7 transcript_id : NM_028968.1

name	2900011O08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625872 GeneID:67254 MGI:1914504
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900011O08 gene transcript_id : NM_144518.3

name	4921513D23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487212 GeneID:223989 MGI:2444505
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4921513D23 gene transcript_id : NM_001081154.1

name	Nde1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:12963634 GeneID:67203 MGI:1914453
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear distribution gene E homolog 1 (A nidulans) transcript_id : NM_023317.1

name	Myh11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305294 GeneID:17880 MGI:102643
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin, heavy polypeptide 11, smooth muscle transcript_id : NM_013607.1

name	2700045P11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267279 GeneID:72555 MGI:1919805
definition	codon_start : 1 product : hypothetical protein LOC72555 isoform 2 protein_id : XP_985407.2

name	EG622509 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267281 GeneID:622509 MGI:3646646
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892035.2

name	Ercc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657064 GeneID:50505 MGI:1354163
definition	GO_component : GO:0000109 - nucleotide-excision repair complex [Evidence ISS] GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006289 - nucleotide-excision repair [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation function : remove DNA damage in nucleotide excision repair pathway product : excision repair cross-complementing rodent repair deficiency, complementation group 4 protein_id : NP_056584.1

name	Gt4-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469513 GeneID:107459 MGI:107691
definition	codon_start : 1 product : gene trap insertion site 4-1 protein_id : NP_862908.1

name	Mkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956388 GeneID:239719 MGI:3050795
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IDA] GO_process : GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0045844 - positive regulation of striated muscle development [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0051145 - smooth muscle cell differentiation [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : myocardin-related transcription factor B product : MKL/myocardin-like 2 protein_id : NP_705816.1

name	Parn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311877 GeneID:74108 MGI:1921358
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004527 - exonuclease activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004535 - poly(A)-specific ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0000184 - mRNA catabolism, nonsense-mediated decay [Evidence IEA]; GO:0016481 - negative regulation of transcription [Evidence IEA] codon_start : 1 product : poly(A)-specific ribonuclease (deadenylation nuclease) protein_id : NP_083037.1

name	LOC100043196 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267368 GeneID:100043196
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480326.1

name	3110001I22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313406 GeneID:66598 MGI:1913848
definition	codon_start : 1 product : hypothetical protein LOC66598 protein_id : NP_079929.1

name	Pla2g10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21356649 CCDS:CCDS27967.1 GeneID:26565 MGI:1347522
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004623 - phospholipase A2 activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006644 - phospholipid metabolism [Evidence IEA] codon_start : 1 product : phospholipase A2, group X protein_id : NP_036117.1

name	A930007A09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51769343 GeneID:432999 MGI:3045309
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484524.1

name	Rrn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87299630 CCDS:CCDS27968.1 GeneID:106298 MGI:1925255
definition	codon_start : 1 note : transcription initiation factor TIF-IA product : RRN3 RNA polymerase I transcription factor homolog protein_id : NP_001034610.1

name	Ntan1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754902 CCDS:CCDS27969.1 GeneID:18203 MGI:108471
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008418 - protein N-terminal asparagine amidohydrolase activity [Evidence IDA] GO_process : GO:0008344 - adult locomotory behavior [Evidence IMP]; GO:0007613 - memory [Evidence IMP] codon_start : 1 note : N-terminal asparagine amidohydrolase; asparagine-specific N-terminal amidase product : N-terminal Asn amidase protein_id : NP_035076.1

name	Pdxdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88758584 GeneID:94184 MGI:1920909
definition	GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0019752 - carboxylic acid metabolism [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : pyridoxal-dependent decarboxylase domain containing 1 isoform 3 protein_id : NP_001034622.1

name	Pdxdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:88758582 GeneID:94184 MGI:1920909
definition	GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0019752 - carboxylic acid metabolism [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : pyridoxal-dependent decarboxylase domain containing 1 isoform 1 protein_id : NP_444411.2

name	Mpv17l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26024193 CCDS:CCDS27970.1 GeneID:93734 MGI:2135951
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Mpv17-like product : Mpv17 transgene, kidney disease mutant-like protein_id : NP_291042.2

name	Ifitm7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21539643 GeneID:74482 MGI:1921732
definition	codon_start : 1 note : interferon induced transmembrane protein 4 like; interferon induced transmembrane protein like 4 product : interferon induced transmembrane protein 7 protein_id : NP_083244.1

name	2900011O08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362305 CCDS:CCDS27971.1 GeneID:67254 MGI:1914504
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC67254 protein_id : NP_653101.1

name	4921513D23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487213 GeneID:223989 MGI:2444505
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] codon_start : 1 note : limkain b1 product : hypothetical protein LOC223989 protein_id : NP_001074623.1

name	Nde1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963635 GeneID:67203 MGI:1914453
definition	GO_component : GO:0005813 - centrosome [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IEA]; GO:0005819 - spindle [Evidence IDA]; GO:0031616 - spindle pole centrosome [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IPI]; GO:0008017 - microtubule binding [Evidence IMP] [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0051298 - centrosome duplication [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007020 - microtubule nucleation [Evidence IDA]; GO:0007067 - mitosis [Evidence IEA]; GO:0051227 - mitotic spindle assembly [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA]; GO:0007405 - neuroblast proliferation [Evidence IMP]; GO:0047496 - vesicle transport along microtubule [Evidence IGI] codon_start : 1 product : nuclear distribution gene E homolog 1 protein_id : NP_075806.1

name	Myh11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305295 CCDS:CCDS27972.1 GeneID:17880 MGI:102643
definition	GO_component : GO:0005859 - muscle myosin [Evidence IDA]; GO:0016459 - myosin [Evidence IEA]; GO:0005863 - striated muscle thick filament [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003774 - motor activity [Evidence IMP]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA]; GO:0006939 - smooth muscle contraction [Evidence IMP]; GO:0006941 - striated muscle contraction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : myosin heavy chain 11, smooth muscle product : myosin, heavy polypeptide 11, smooth muscle protein_id : NP_038635.1

name	LOC622553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622553
definition	number : 1 pseudo : _no_value

name	LOC622757 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267374 GeneID:622757
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins product : LOC622757 gene transcript_id : XR_034626.1

clone name	MSMg01-496E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348L24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432I09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287E16
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-293I04.T7 (MSMg01no293_i04.b1)	MSMg01-293I04.TJ (MSMg01no293_i04.g1)
ACC	AG421945	AG421946
length	734	850
length of high quality (start - end)	268 (42 - 309)	---
definition	CHROMAT_FILE: MSMg01no293_i04.b1 PHD_FILE: MSMg01no293_i04.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:28:56 2005	CHROMAT_FILE: MSMg01no293_i04.g1 PHD_FILE: MSMg01no293_i04.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 21:28:56 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT CAGTCAAGCTATTTGCCTACTACAAGTTGTAAGCCAGCTATAGGCCCAGT ACCTATTAACTCTGTATCTTCCCACCAGCCTCTGGAGGTTGAAAGTACTT CCCGTCTTTACTTCACAGAAAGGAGACAGAGCCATAGAGTAGCTGAGAAA CTCGGACCCTGAGTTAGTGATCTTACCCTTCTCACGAGGAGACCTCAATG CAGCTGAGAAGTTGGTGGTTTTCTTAGAGCACCTAATGGCACATGGTACA CACCAGTAAAACAGTAAGAGTTTGAGAGCAGGGGATATGTGTGTGGCACC TTGATCAGTTTTCTCCTCCCCCCCACTCCCTAGAAGTATAACCTCAGGTG TCTGCCTTTGCCTTCCACCCTGAAAGAGACAGAGTTTCTTGCTGCCGAGC TCAAATGCCTGGCTAGTTGGTCTGCAGCCTCTGGTTGCCTGTCTCTCGTA GGTACACTTGGGCATACTGATGTGCCTGACCATGTCTTGCTTTATTGTGA GCTCAAACCTCCAGCTTCCTGCTTGTACTTCTTGCCCCCTGTTCCACCTG TAATACTCTTCCCTGCCCTTCGTTTTGCCTACCCGAATATTTCGGTTCTG CAGTTTTGTGCCACCCTTGGTACCCTTACGCCCAATCTGTCCGGTGTAAT AATGACCGGGCAAGGTTGCTTTATTCCTCCCCCG	GAGACGAGACGCTCATGGCGAGGGACGGGTGCGCCCCAACGACGGAGAAG CGCACAAAGGATCCCCCGCAATAGCCGAGCTCAACCGGAACGGATCGACC GACCAACGCCGATGGAGCCTGTGTTGCCCCAAAACAAAGGGGCGGCGCCG GGAGCCGATATCGCCCCGCCGAATACGCCGTGGGAAAATAACCGGAACGG CGCGGGTAGACGGAAAGAAGATACAGTATATATAAAAGCGGGGACCCCGA AACGAGCGGCGCGCGACGCTCACACTTAGATACCCCGTCGCCCCTAAACC GCCGGGGCGCTACCGACCGTGAGGGAGCAGCGCGTCCACGCATTAGAGCA ATGTCGCGGGCGCGCGAACGAACCCACCGAGGCAGGAATCATACTTTGAA TAACTTTCCCGAGACGTGACCCCCGTTGAGGACGTGGGGTTAGAGGCGCG NGGGCGTCCTCTCCAACAAAAAAAGGGACGAAAAAAAAGGGCGGCGGCCC GCCGGGGGAGCTGTTCTTCAAACGACGCCGCACAACGCTTAGTCGGCGAC GTCGCCAACAGCCGTCGTGGCGCCGCCAAATGCGCCTGGTTGACGAGACC CACGCGCGTACCCCCGCCGATCAATTCGCCCCGGTGAGCTAAACGGCGGC GTGATTTCGCCGCGCGCGGCCAATCACACAGTGCACTGGCGACAATATAC GCCATATCCTACCGGCGACAATTGGTCTTCCGGGGTCAGTGCGCGCCGCC GACTTGCAGGGTTAAGACAGACACCGGGCCGTCAGTCTGAAACGATACCT TTCGCGGGATCAGTACGCGGACTACACGCATATTCGCGACGACGTAACAG
quality values	Open. Hide. 12 12 27 27 37 41 39 23 22 17 15 15 21 19 20 22 28 28 28 37 47 35 28 28 28 28 35 44 48 48 47 42 48 48 57 57 42 42 36 36 36 36 47 47 47 42 47 47 47 47 50 41 41 41 50 57 57 57 59 59 59 48 57 57 48 48 54 57 57 57 50 50 47 47 47 47 47 46 47 47 54 59 43 48 42 42 42 47 48 48 48 57 48 48 43 43 43 43 43 42 59 59 59 59 50 48 48 48 39 37 37 37 29 22 8 7 7 8 19 23 37 37 37 37 37 37 43 43 43 48 46 57 43 43 37 33 33 37 43 43 43 43 43 43 43 48 48 54 57 57 57 59 59 54 54 57 57 57 59 59 57 48 48 42 37 37 37 37 37 37 37 43 47 46 46 47 47 47 47 48 57 57 57 57 57 44 44 43 43 43 43 42 37 37 44 32 35 30 35 32 38 37 50 35 35 32 35 35 43 44 44 46 52 52 52 38 38 15 15 32 38 57 68 68 68 68 68 68 68 59 57 54 50 48 48 48 47 57 46 41 41 41 47 42 42 39 37 37 35 39 39 44 44 48 44 44 23 20 20 27 18 20 31 27 29 32 32 32 39 39 48 48 54 57 57 48 48 43 43 43 57 43 47 47 43 43 59 43 43 43 43 43 43 43 43 39 36 43 43 32 37 28 28 32 32 28 32 20 20 20 28 25 25 22 11 11 12 15 18 28 25 25 13 13 12 12 13 15 15 15 15 18 18 22 23 40 40 32 24 16 11 11 12 15 15 11 15 15 30 24 30 30 37 28 32 13 10 9 6 7 8 6 6 6 6 6 6 8 8 11 12 14 17 9 9 9 9 9 17 11 11 11 11 12 11 18 20 31 29 30 35 35 25 30 17 13 12 12 12 12 12 12 14 19 24 34 39 43 43 28 28 20 20 15 22 11 11 11 15 15 12 13 11 11 11 11 9 12 11 14 11 12 11 11 11 19 16 21 22 17 10 8 7 8 8 8 10 12 12 11 12 11 12 12 13 24 21 19 14 19 13 13 15 16 10 10 10 10 10 14 13 20 12 11 10 15 16 19 32 32 46 33 33 28 22 18 17 10 10 11 11 11 15 30 30 32 24 14 14 13 13 10 10 10 11 14 15 23 19 15 8 8 6 6 8 10 10 10 14 10 13 10 8 8 8 10 15 16 10 10 10 10 10 19 18 24 34 36 32 18 10 10 12 12 15 20 11 11 11 15 15 10 13 9 9 9 8 12 8 8 12 8 10 10 9 9 12 13 12 8 8 8 9 10 10 12 11 11 10 12 8 8 8 8 10 13 14 15 10 10 10 10 10 9 9 9 10 12 13 13 10 8 8 8 8 10 10 12 12 8 8 10 16 13 12 8 9 7 10 8 8 8 8 10 10 10 10 8 8 8 10 8 8 10 8 8 9 10 14 10 10 9 6 6 8 8 8 8 14 15 12 11 11 10 13 9 8 10 8 8 8 8 8 8 8 10 12 12 10 12 10 10 10 10 11 8 8 8 8 8 8 11 9 13 10 10 9 6 6 6 6 6 6 13 14 14 10 10 10 8 8 8 10 10 11 16 18 11 8 8 8 8 8 7 7 8 10 9 9 9 8 7 8 8 8 8 10 10 10 10 8 8 8 8	Open. Hide. 9 9 9 9 9 9 8 8 8 8 9 8 8 8 6 6 6 17 11 11 10 10 12 15 9 9 9 10 6 6 6 6 8 7 7 8 8 10 10 6 8 8 7 7 7 8 8 7 11 6 6 8 8 8 8 10 10 11 10 10 11 11 11 13 10 9 9 8 7 7 10 10 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 8 8 8 8 8 8 6 6 8 8 10 8 8 8 6 6 8 6 9 9 10 8 8 8 8 8 8 11 13 10 10 8 8 8 8 8 8 8 8 11 12 13 10 9 7 8 7 6 6 8 6 7 8 8 8 6 6 6 6 6 8 6 7 8 8 9 10 10 9 9 6 6 6 6 8 6 6 8 8 8 8 8 10 10 9 9 8 8 8 8 8 6 8 8 10 10 8 8 8 10 8 8 8 8 11 10 10 10 8 10 8 9 13 6 6 8 8 9 9 11 11 8 8 8 8 8 8 11 11 10 10 10 8 8 8 8 13 10 8 6 6 6 8 6 8 8 8 9 8 10 8 8 8 9 16 11 10 11 8 8 8 8 9 9 8 8 8 8 8 10 16 16 11 11 11 8 8 8 8 8 6 8 8 8 8 10 10 8 8 8 8 6 6 6 8 8 8 8 8 8 8 7 6 6 7 7 8 7 7 7 8 8 8 8 8 10 16 15 12 8 8 6 6 8 8 8 8 9 8 8 8 8 8 8 13 8 10 6 6 8 8 8 8 8 8 8 8 8 6 8 8 6 8 8 8 10 10 12 10 8 8 8 10 8 8 8 8 8 8 6 6 8 8 8 8 12 8 8 6 7 8 8 8 8 8 8 8 10 12 10 10 10 10 8 7 6 8 8 8 8 7 7 13 7 6 6 6 7 7 9 7 7 8 8 8 8 8 8 8 8 10 9 7 7 7 8 7 6 6 7 6 6 6 8 12 12 10 10 10 10 13 15 13 14 8 8 7 7 8 8 8 7 7 8 8 7 7 10 8 8 8 10 3 0 3 11 8 8 8 8 10 10 11 11 11 18 12 11 11 11 8 8 10 11 11 11 17 16 11 8 8 8 8 8 8 9 19 23 11 10 6 6 8 6 6 6 7 8 8 6 6 6 7 7 7 8 8 15 8 9 8 8 8 8 10 10 11 11 11 9 9 9 8 6 6 6 8 10 6 7 10 10 10 8 10 13 8 12 12 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 10 8 9 8 8 8 8 6 6 8 6 8 8 8 8 8 8 9 9 10 10 9 9 9 9 9 9 10 8 8 8 8 8 8 11 11 11 9 9 8 6 6 6 6 8 8 16 12 12 12 9 9 9 10 8 8 8 7 7 14 12 12 8 8 8 8 9 9 11 8 8 8 8 8 8 8 8 8 12 11 11 8 8 8 8 8 6 9 9 10 8 8 8 8 8 8 6 6 6 6 8 8 10 8 9 6 8 8 8 9 9 8 8 6 6 10 7 6 6 8 8 8 8 8 8 10 10 8 8 8 8 8 10 8 8 8 11 13 9 9 8 10 8 8 8 8 8 8 8 8 8 8 10 19 10 8 8 8 8 8 6 6 6 6 8 8 8 11 11 10 10 10 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 9 11 11 11 8 8 8 6 7 10 6 8 8 9 9 9 9 10 9 11 10 8 8 8 8 9 10 10 8 8 8 8 8 8 8 8 8 6 6 8 8 10 11 10 9 9 11 12 11 12 11 11 11 10 10 10 8 8 8 7 8 8 6 6 8 7 8 10 10 8 10 10 8 10 8 8 8 10 9 9 9 9 8 8 8 10 8 8 8 8 8 8 8 6 6 8 7 6 8 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no293_i04.b1 MSMg01no293_i04.b1 CHROMAT_FILE:
MSMg01no293_i04.b1 PHD_FILE: MSMg01no293_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:56 2005
         (268 letters)



>mm_chr16_13224167_13224834
          Length = 668

 Score =  474 bits (245), Expect = e-138
 Identities = 260/265 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtcaagctatttgcctactacaagttgtaagccagctataggcccagtacct 63
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtcaagctatttgcctactacaagctgtaagccagctataggcccagtacct 263

                                                                       
Query: 64  attaactctgtatcttcccaccagcctctggaggttgaaagtacttcccgtctttacttc 123
           |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 264 attaactctgtaccttcccaccagcctctggaggttgaaagtacttcccatctttacttc 323

                                                                       
Query: 124 acagaaaggagacagagccatagagtagctgagaaactcggaccctgagttagtgatctt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagaaaggagacagagccatagagtagctgagaaactcggaccctgagttagtgatctt 383

                                                                       
Query: 184 acccttctcacgaggagacctcaatgcagctgagaagttggtggttttcttagagcacct 243
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 384 acccttctcacgaggagacctcagtgcagctgagaagttggtggtttccttagagcacct 443

                                    
Query: 244 aatggcacatggtacacaccagtaa 268
           |||||||||||||||||||||||||
Sbjct: 444 aatggcacatggtacacaccagtaa 468


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space:   170681
Effective search space used:   170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information