Query= MSMg01no294_c22.b1 MSMg01no294_c22.b1 CHROMAT_FILE:
MSMg01no294_c22.b1 PHD_FILE: MSMg01no294_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:48 2005
(323 letters)
>mm_chr16_83583557_83584279
Length = 723
Score = 617 bits (319), Expect = 0.0
Identities = 319/319 (100%)
Strand = Plus / Plus
Query: 5 gaattcacatgaaacaattttatactttcctaatattaataatatataactgcacaccct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatgaaacaattttatactttcctaatattaataatatataactgcacaccct 264
Query: 65 ccataaaatattattcttatcaggtataaatatagaaggtcactaaaatagttcttatta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ccataaaatattattcttatcaggtataaatatagaaggtcactaaaatagttcttatta 324
Query: 125 gtgcaaagtactgtatgtattggtgatctagcaatgaaattaccatcaaggctttattgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgcaaagtactgtatgtattggtgatctagcaatgaaattaccatcaaggctttattgc 384
Query: 185 taaagtcatttgaaagtaaaatattttattacagctagtctttcagtctcacaactctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaagtcatttgaaagtaaaatattttattacagctagtctttcagtctcacaactctga 444
Query: 245 attcacacacatcttaacatttccacttgaaaagccatcatgctagatgcattgctttca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attcacacacatcttaacatttccacttgaaaagccatcatgctagatgcattgctttca 504
Query: 305 aatattagcacttccttct 323
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Sbjct: 505 aatattagcacttccttct 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_c22.g1 MSMg01no294_c22.g1 CHROMAT_FILE:
MSMg01no294_c22.g1 PHD_FILE: MSMg01no294_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:48 2005
(292 letters)
>mm_chr16_83753399_83754091
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 292/293 (99%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 1 ctacagcttttcattaaatgattcatgttttagctctctacttaattattatattgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctacagcttttcattaaatgattcatgttttagctctctacttaattattatattgttgt 434
Query: 61 atatatccctaaactggacatataaatgtgcttctcatttaaacacaagatttgatgagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atatatccctaaactggacatataaatgtgcttctcatttaaacacaagatttgatgagt 374
Query: 121 actgatttttctctcaacaaacatcagtttagagatttttttcataatggctctctttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 actgatttttctctcaacaaacatcagtttagagatttttttcataatggctctctttta 314
Query: 181 aattattcaagaattttcacttatttattcttcaataa-ttttttttctcactcaaagaa 239
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 313 aattattcaagaattttcacttatttattcttcaataatttttttttctcactcaaagaa 254
Query: 240 tggctatttgtaaggagcgggcatttagctatataggtagatcattactggag 292
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Sbjct: 253 tggctatttgtaaggagcgggcatttagctatataggtagatcattactggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
