Query= MSMg01no296_i19.b1 MSMg01no296_i19.b1 CHROMAT_FILE:
MSMg01no296_i19.b1 PHD_FILE: MSMg01no296_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:46 2005
(364 letters)
>mm_chr16_65461374_65462138
Length = 765
Score = 675 bits (349), Expect = 0.0
Identities = 361/365 (98%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 1 aaaaattcaaaaaaccttcccttctgaagaaggcttacactatttttggcctttattaaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 aaaaattcaaaaaaccttcccttctgaagaaggtttacactatttttggcctttattaaa 260
Query: 61 ataattataaattataaaatgcagaatatacttcaagaaaaattaaaaattccaatttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataattataaattataaaatgcagaatatacttcaagaaaaattaaaaattccaatttga 320
Query: 121 gtggatcagttgttctctaagagtcgtgtttccagaacacacatgcacacatgcacacat 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggatcagttgtgctctaagagtcgtgtttccagaacacacatgcacacatgcacacat 380
Query: 181 gcaaagtctcagaagccttcagatttactttggaaaaagctgttctagctttactgaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcaaagtctcagaagccttcagatttactttggaaaaagctgttctagctttactgaagt 440
Query: 241 gaaacatttataaaccactcttggaattaactccctattgttagtttgaagacatttggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaacatttataaaccactcttggaattaactccctattgttagtttgaagacatttggg 500
Query: 301 aagatttttt-ggtagaaaaatacatatatattatttagacatgatgaatatgctatttt 359
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagatttttttggtagaaaaataaatatatattatttagacatgatgaatatgctatttt 560
Query: 360 aagaa 364
|||||
Sbjct: 561 aagaa 565
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 765
Length adjustment: 9
Effective length of query: 355
Effective length of database: 756
Effective search space: 268380
Effective search space used: 268380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no296_i19.g1 MSMg01no296_i19.g1 CHROMAT_FILE:
MSMg01no296_i19.g1 PHD_FILE: MSMg01no296_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:46 2005
(652 letters)
>mm_chr16_65461055_65462106
Length = 1052
Score = 1212 bits (627), Expect = 0.0
Identities = 646/653 (98%), Gaps = 3/653 (0%)
Strand = Plus / Plus
Query: 1 aattcttctgtttgacattatgtggttgctgcttaagaaaatgaaatttgttcatagatg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 203 aattcttctgtttgacattatgtggttgctgcttaagaaactgaaatttgttcatagatg 262
Query: 61 agtaaataagtgttataattaaaaaaaaatatatcagactgttggaatgttttatcctga 120
||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 263 agtaaataagtgttagaattaaaaaaa--tatatcagactgttggaatgttttatcctga 320
Query: 121 gacttgaaagtgggctcataactactaaaatgatagagtacactgttagtgtgactctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacttgaaagtgggctcataactactaaaatgatagagtacactgttagtgtgactctat 380
Query: 181 ttggcatacagatgaaatagccaaacctacaaaatttctttctaaatgataatttatggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggcatacagatgaaatagccaaacctacaaaatttctttctaaatgataatttatggg 440
Query: 241 ggaaacctttctgaaagtagttgtgatgtccccatacaagtagaaaacaacaacaataaa 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaacctttctgaaagtagctgtgatgtccccatacaagtagaaaacaacaacaataaa 500
Query: 301 aaacaaaaaccaagattaaaaaaattcaaaaaaccttcccttctgaagaaggtttacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacaaaaaccaagattaaaaaaattcaaaaaaccttcccttctgaagaaggtttacact 560
Query: 361 atttttggcctttattaaaataattataaattataaaatgcagaatatacttcaagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttttggcctttattaaaataattataaattataaaatgcagaatatacttcaagaaaa 620
Query: 421 attaaaaattccaatttgagtggatcagttgttctctaagagtcgtgtttccagaacaca 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 attaaaaattccaatttgagtggatcagttgtgctctaagagtcgtgtttccagaacaca 680
Query: 481 catgcacacatgcacacatgcaaagtctcagaagccttcagatttactttggaaaaagct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 catgcacacatgcacacatgcaaagtctcagaagccttcagatttactttggaaaaagct 740
Query: 541 gttctagctttactgaagtgaaacatttataaaccactcttggaattaactccctattgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttctagctttactgaagtgaaacatttataaaccactcttggaattaactccctattgt 800
Query: 601 tagtttgaagacatttgggaagatttttt-ggtagaaaaataaatatatatta 652
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 801 tagtttgaagacatttgggaagatttttttggtagaaaaataaatatatatta 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
