Query= MSMg01no297_k17.b1 MSMg01no297_k17.b1 CHROMAT_FILE:
MSMg01no297_k17.b1 PHD_FILE: MSMg01no297_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:09 2005
(507 letters)
>mm_chr16_57636540_57637447
Length = 908
Score = 913 bits (472), Expect = 0.0
Identities = 499/510 (97%), Gaps = 5/510 (0%)
Strand = Plus / Plus
Query: 1 attctgtgttagctgacca---taccgtttagatgtaaggtatggagcacagccaaaaag 57
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgtgttagctga--aaagtaccgtttagatgtaaggtatggagcacagccaaaaag 258
Query: 58 gcaaatcaaaaccaactgagactttcaaaagaagacaaagcaagagtgagattaactgca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gcaaatcaaaaccaactgagactttcaaaagaagacaaagcaagagtgagattaactgca 318
Query: 118 atagtgataaatgtaaaccgaataaagcaaaccaacaacaacaaacaacaacaaaagacc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atagtgataaatgtaaaccgaataaagcaaaccaacaacaacaaacaacaacaaaagacc 378
Query: 178 tgttgaacgaatgctgccctttatcttgtcagaattgccaatccccatctctttgaaaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgttgaacgaatgctgccctttatcttgtcagaattgccaatccccatctctttgaaaag 438
Query: 238 cttcctgaatgtttcctgtagttggacaaggttggaaggagatctcgtttcctccatgta 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttcctgaatgtttcctgtagttggacaaggttggaaggagatctcgtttcctccatgta 498
Query: 298 tgatatacacaccagactaacatgacacatattattttagatgctgtgaacatacctttt 357
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 499 tgatatacacaccagactaacatgacacatattattttagatgctgtgaacaaacctttt 558
Query: 358 gtctatttatcctcgtgaaaccctcgattgctatacaaaacgattattagatatttaccc 417
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtctatttatcctcgtgaaattttcgattgctatacaaaacgattattagatatttaccc 618
Query: 418 ttcagtctttgctctgtacctaacttagttttgtgcatagtgggaataagtccctcttat 477
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 619 ttcagtctttgctctgtatctaacttagttttgtgcatagtgggaacaagtccctcttat 678
Query: 478 ctgccaggccactctttgtcttgacatggg 507
||||||||||||||||||||||||||||||
Sbjct: 679 ctgccaggccactctttgtcttgacatggg 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 908
Length adjustment: 10
Effective length of query: 497
Effective length of database: 898
Effective search space: 446306
Effective search space used: 446306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_k17.g1 MSMg01no297_k17.g1 CHROMAT_FILE:
MSMg01no297_k17.g1 PHD_FILE: MSMg01no297_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:09 2005
(526 letters)
>mm_chr16_57798682_57799607
Length = 926
Score = 750 bits (388), Expect = 0.0
Identities = 410/422 (97%), Gaps = 8/422 (1%)
Strand = Plus / Minus
Query: 105 tcatttggtcctactgagaagctgtgaagctaatctggtcctacagaagtttctagaatt 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 tcatttggtcctactgagaagctgtgaagctaatctggtcctacagaagtttctagaatt 867
Query: 165 gaggcagagaagcaagatctctgagctctcttccttttcaattatgtgacataagctggc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 gaggcagagaagcaagatctctgagctctcttccttttcaattatgtgacataagctggc 807
Query: 225 tcaaaggagaaagcacacttgtgaatgattcagcaccctctgcctgagtaatgtttgttt 284
|||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 806 tcaaaggagaaagcacacttgtgaatgaagcagcaccctctgcctgagtaa--------t 755
Query: 285 gtttgtttgtttgtttgtttgtttgtttttaagagcttccgtgttgaggtaccttcaaca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 gtttgtttgtttgtttgtttgtttgtttttaagagcttccgtgttgaggtaccttcaaca 695
Query: 345 acgctcgtcatgaatgtagaaaaaggtgtgtcagatctgaagggaccatctggaggaggt 404
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 atgctcgtcatgaatgtagaaaaaggtgtgtcagatctgaagggaccatctggaggaggt 635
Query: 405 cacagcatctactacacacttcagcaggaaggagtttaaatattatttcctgaaatattg 464
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 634 cacagcatctactacacacttcaccaggaaggagtttaaatattatttcctgaaatattg 575
Query: 465 ggaaaacatggtcataaaagtcaaagaaagacagcaaataatatctaccaaaaagtatct 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggaaaacatggtcataaaagtcaaagaaagacagcaaataatatctaccaaaaagtatct 515
Query: 525 gt 526
||
Sbjct: 514 gt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space: 472656
Effective search space used: 472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
