TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTCTGTATCCCAGGCTGGCCTTGAACTCAGAAATCCGTCTGCCT
CTGCCTCCCAAGTACTGGGATTAAAGGCATGCACAACCACCGCCCAGCCC
TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC
TTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTC
TTTTCTTTTCTTTTCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC
TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTC
TTCTCTTGACTAGAATTGACTTGATTTTAACTGAACTTAAATGTCAAGTG
TAGTGGAGTCGGGACGGAATGGAATGGAATTGACTGGACTGGAAATGAAA
AAATCATGTGATGTGAAATGAAATGAAAGGAAATGAATTGAACTTAAATG
AACTGGAAGACTGCGCAGTGCAATGAAGAGATAACACTTCACTCCAATCA
TATAACTTACGGTTAGTTATGTCATAGATTGATTCCATCTCAAGTCCAGT
CTAATCTAAACTAACCTACACTTCACCTAACCTCATTTCTCAAGATAAAG
CTATGGCAACGGAATAGAACTTACTTTATTTTAAATTACCGTCAATTATA
CTCAAATTCTATTTTAGTTCAAGTAAAAG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCATCTATACTCTTGTCATACTTCCAC
GTTTTAAAAATGTTCTTTTAAAATCCTTAAGATGGAGAGGGATCTTTGAG
ATCCTCTTGTTCAATTTTAATGATAAGAAAATTGTCACTCAGAACAAGCG
AGGAACTTGTTCAAGATTTTGTCATTTATTAGTGTCAGGCAGAAGGCAAT
AAAGCCAGTCTCCAGATTATTGTTTTTAAAAGTTCTTCCCATGACTTGTT
AGAATTCTTTGGAAACCCTTACCTATAACCAGAAAGGGGTGTCTCTCTGG
CTTATTCTTGCTCAGTTGAAAGGTAAATATACATATACATTATATGTATT
ATATATGTTATATAATACATATATTATATTTCATATGTATCTTATATATG
ATATATATTGCCCTAGAACTTTATAATCTTTGGTATAGCCTCACCTTCCC
CACTCAGTGCTGTAGACAGTGATCCTGATAGAATACAGAAAAAACCTAGC
ATCATACCCTTCTTTGTTTTTTTTCTTTTTTTATTAGATATGTTCTTTAA
TTACATTTCAAATGCTGTCTCAAAAGTTCCCTATACCCTCCCCCCACCCT
GCTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGTGTTCCCCCTGTA
CTGCGGCATATAAAGTTTGTAAGACG

Query= MSMg01no298_c05.g1 MSMg01no298_c05.g1 CHROMAT_FILE:
MSMg01no298_c05.g1 PHD_FILE: MSMg01no298_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:45 2005
         (627 letters)



>mm_chr16_55405276_55406302
          Length = 1027

 Score = 1199 bits (620), Expect = 0.0
 Identities = 626/628 (99%), Gaps = 1/628 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatctatactcttgtcatacttccacgttttaaaaatgttcttttaaaatccttaagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatctatactcttgtcatacttccacgttttaaaaatgttcttttaaaatccttaagat 260

                                                                       
Query: 61  ggagagggatctttgagatcctcttgttcaattttaatgataagaaaattgtcactcaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagagggatctttgagatcctcttgttcaattttaatgataagaaaattgtcactcaga 320

                                                                       
Query: 121 acaagcgaggaacttgttcaagattttgtcatttattagtgtcaggcagaaggcaataaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaagcgaggaacttgttcaagattttgtcatttattagtgtcaggcagaaggcaataaa 380

                                                                       
Query: 181 gccagtctccagattattgtttttaaaagttcttcccatgacttgttagaattctttgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccagtctccagattattgtttttaaaagttcttcccatgacttgttagaattctttgga 440

                                                                       
Query: 241 aacccttacctataaccagaaaggggtgtctctctggcttattcttgctcagttgaaagg 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacccttacctaaaaccagaaaggggtgtctctctggcttattcttgctcagttgaaagg 500

                                                                       
Query: 301 taaatatacatatacattatatgtattatatatgttatataatacatatattatatttca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaatatacatatacattatatgtattatatatgttatataatacatatattatatttca 560

                                                                       
Query: 361 tatgtatcttatatatgatatatattgccctagaactttataatctttggtatagcctca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatgtatcttatatatgatatatattgccctagaactttataatctttggtatagcctca 620

                                                                       
Query: 421 ccttccccactcagtgctgtagacagtgatcctgatagaatacagaaaaaacctagcatc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttccccactcagtgctgtagacagtgatcctgatagaatacagaaaaaacctagcatc 680

                                                                       
Query: 481 atacccttctttgtttttttt-ctttttttattagatatgttctttaattacatttcaaa 539
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacccttctttgtttttttttctttttttattagatatgttctttaattacatttcaaa 740

                                                                       
Query: 540 tgctgtctcaaaagttccctataccctccccccaccctgctcccctacccacccactccc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgctgtctcaaaagttccctataccctccccccaccctgctcccctacccacccactccc 800

                                       
Query: 600 acttcttggccctggtgttccccctgta 627
           ||||||||||||||||||||||||||||
Sbjct: 801 acttcttggccctggtgttccccctgta 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)