NTTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGATCTTTCTCAGAACTTTTATCATGAATGGGTGTTGGAT
CTTGTCAAATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTTGT
CTTTGAGTTTGTTTATATAGTGGATTACATTGATGGATTTTAGTATATTA
AACCATCCCTGCATTCCTGGAATAAAACCTACTTGGTCAGGATGGATGAT
TGCTTTAATGTGTTCTTGGATTCGGTTAGTGAGAATTTTATTGAGGATTT
TTGCATCGATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTT
GGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGA
GTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAA
CTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCG
TCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTAT
TTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTCA
ACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTT
TCCAGTTTTGTTGAGTATAGCCTTTTGTAAAAAGAATTGAAGGTGTTTTC
GGATTCCTTCTAGATCTGTTGTTATGGTTCCTCTTTTCCTATTCCACTTT
CTTAATTTTG

ACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTTCCCATCTCTGGCTGATTTAA
AAGAGCTATTTTCAGGCTTTCCTGAGAAGCACAAAAGAGAAGAGTGAAAG
GGTTGGACCAGAACGGCTATCCAGAGAATTCTCTTGCCTAGCAAGTAAGT
AGTCGGGGAAAGAATGCAGTATGATGTCTGGAAGAAACACAGAAGAGTCG
GCCAAAGGGAGGAGCAGGGTTTAAATGATGGAAATAAAAACGTTTGAGGA
GCTATTCTAAATGTTTTGGTGTTCAGCATTCCTATTGAAAGAGACAAGAC
TATCTGTGTGCTAAAGTCTGGCTGCCTCTTTATAAGAACTACTTGAAGTA
TACAGTACAGAGAAAGTGAAAGTCATATTTGAAAATTTTTATATAAACTA
GCCAAAATGTGGTGGTACACACACACACACACACACACACACACACACAT
GTTTTTCAGTATCTTGAAAGAATGAAAAGTACTATTGTATTCTGATATAG
GGTTCTTCATAATTACCATTAATTACCACCAAGAGAACATGAGAGAATAC
AAAATGACCAAGAATCTGGCTACCCCCACCCCATACATACACACATGTAG
AGGAATGAGCTGTGAAGGTAAGAAAATCTCACCCGGATTTTTTGACTGAA
TGGGGAAAATGACTTCCTTCTGCTCAAAGCTATTTGTCCAGGCTGCATAT
CG

Query= MSMg01no299_a22.g1 MSMg01no299_a22.g1 CHROMAT_FILE:
MSMg01no299_a22.g1 PHD_FILE: MSMg01no299_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:35:52 2005
         (527 letters)



>mm_chr16_27467572_27468501
          Length = 930

 Score =  766 bits (396), Expect = 0.0
 Identities = 504/566 (89%), Gaps = 44/566 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccttcccatctctggctgatttaaaagagctattttcaggctttcctgagaagcacaaaa 60
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 ccttcccatctccagctgatttaaaagagctattttcaggctttcctgagaagcacaaaa 229

                                                                       
Query: 61  gagaagagtgaaagggttggaccagaacggctatccagagaattctcttgcctagcaagt 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gagaagagtgaaagagttggaccagaacggctatccagagaattctcttgcctagcaagt 289

                                                                       
Query: 121 aagtagtcggggaaagaatgcagtatgatgtctggaagaaacacagaagagtcggccaaa 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aagtagtgggggaaagaatgcagtatgatgtctggaagaaacacagaagagtcggccaaa 349

                                                                       
Query: 181 gggaggagcagggtttaaatgatggaaataaaaacgtttgaggagctattctaaatgttt 240
           ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 350 gggaggagcagggtttaaatgatggaactaaagacgtttgaggagctattctaaatgttt 409

                                                                       
Query: 241 tggtgttcagcattcctattgaaagagacaagactatctgtgtgctaaagtctggctgcc 300
           |||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||
Sbjct: 410 tggtgttcagcattcctattgaaagagacaagactatctgcgtgctaaagtccagctgcc 469

                                                                       
Query: 301 tctttataagaactacttgaagtatacagtacagagaaagtgaaagtcatatttgaaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctttataagaactacttgaagtatacagtacagagaaagtgaaagtcatatttgaaaat 529

                                                                       
Query: 361 ttttatataaactagccaaaatgtggtggtacacacacacacacacacac---------- 410
           |||||||||||||||||||||||||||  ||||| | | | | | | | |          
Sbjct: 530 ttttatataaactagccaaaatgtggta-tacactctctctctctctctctctctctctc 588

                                                                       
Query: 411 ------------------------acacacacacacatgtttttcagtatcttgaaagaa 446
                                   ||||||||||||  ||||||||||||||||||||||
Sbjct: 589 tctctctctctttctctctctctcacacacacacac--gtttttcagtatcttgaaagaa 646

                                                                       
Query: 447 tgaaaagtactattgtattctgatatagggttcttcataattaccattaattac-----c 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||     |
Sbjct: 647 tgaaaagtactattgtattctgatatagggttcttcataattaccattaattacaataac 706

                                     
Query: 502 accaagagaacatgagagaatacaaa 527
           |  |||||||||||||||||||||||
Sbjct: 707 a--aagagaacatgagagaatacaaa 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 930
Length adjustment: 10
Effective length of query: 517
Effective length of database: 920
Effective search space:   475640
Effective search space used:   475640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)