Query= MSMg01no300_f08.b1 MSMg01no300_f08.b1 CHROMAT_FILE:
MSMg01no300_f08.b1 PHD_FILE: MSMg01no300_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:27 2005
(310 letters)
>mm_chr16_35821676_35822385
Length = 710
Score = 545 bits (282), Expect = e-159
Identities = 300/306 (98%)
Strand = Plus / Minus
Query: 5 gaattcagacaagatagaataataattcaatatctaaagtccacgtaaaatttaatatgg 64
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaattcggacaagaaagaataataattcaatatctaaagtccacgtaaaatttaatatgg 451
Query: 65 attggataatattatcataagtttttcctcttcaaactagataaattgatttacaagatt 124
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 attggataaaagtattataagtttttcctcttcaaactagataaattgatttacaagatt 391
Query: 125 atgtataaaaaatagaagcaagaatagccaggaaaacactttaataaaaatgtgctgaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 atgtataaaaaatagaagcaagaatagccaggaaaacactttaataaaaatgtgctgaga 331
Query: 185 gaagtcagtcttattagctgtgaccaacatggcagatttggtaaataaagcaggagcagg 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 330 gaagtcagtcttattagctgtgaccaacacggcagatttggtaaataaagcaggagcagg 271
Query: 245 aagaaggaagaagagactttcacacaaaccaagtctctcacagtcctactgggattggga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aagaaggaagaagagactttcacacaaaccaagtctctcacagtcctactgggattggga 211
Query: 305 aaaccg 310
||||||
Sbjct: 210 aaaccg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_f08.g1 MSMg01no300_f08.g1 CHROMAT_FILE:
MSMg01no300_f08.g1 PHD_FILE: MSMg01no300_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:27 2005
(155 letters)
>mm_chr16_35664394_35664948
Length = 555
Score = 257 bits (133), Expect = 2e-73
Identities = 150/159 (94%), Gaps = 8/159 (5%)
Strand = Plus / Plus
Query: 1 accagtgaggccacaaggcccagcaaaggcaacatcagatgtgtttc--cc--ccctgag 56
||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 201 accagtgaggccacaaggcccagcaaaggcaacatcagatgtg----ggcctaccctgag 256
Query: 57 cagctcctgtgtggagttggggaatccagcaggagggcattgatgaggaggattcatgag 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 cagctcctgtgtggagttggggaatccagcaggagggcattgatgaggaggattcatgag 316
Query: 117 atatgttggaagctgagtttaacaaaatccaattgagaa 155
||||||||||||||||||||||||||| |||||||||||
Sbjct: 317 atatgttggaagctgagtttaacaaaacccaattgagaa 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 155
Length of database: 555
Length adjustment: 8
Effective length of query: 147
Effective length of database: 547
Effective search space: 80409
Effective search space used: 80409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
