Query= MSMg01no301_c22.b1 MSMg01no301_c22.b1 CHROMAT_FILE:
MSMg01no301_c22.b1 PHD_FILE: MSMg01no301_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:31 2005
(680 letters)
>mm_chr16_78046567_78047646
Length = 1080
Score = 1197 bits (619), Expect = 0.0
Identities = 663/687 (96%), Gaps = 16/687 (2%)
Strand = Plus / Minus
Query: 1 gtgatagaagaagatagaga-------tttttttttctatatatacaatggacaaagcac 53
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 694 gtgatagaagaagatagagatttcttttttttttttctatatatacaatggacaaagcac 635
Query: 54 tggggaaagagacacaggtaagctttatcttcaagctgctcataatgcagtaactataaa 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tggggaaagagacacaggtaagctttatcttcaagctgctcataatgcagtaactataaa 575
Query: 114 agtaccttgggtgcatcaatccctttagcactggaaaggaacacacacattacaaatgga 173
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 agtaccttgattgcatcaatccctttagcactggaaaggaacacacacattacaaatgga 515
Query: 174 ataacaactggaaaaaatcactaaacttagttgaaagaaaatagcaaacatattattttg 233
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ataacaactggaaaaaatcattaaacttagttgaaagaaaatagcaaacatattattttg 455
Query: 234 atagctgtcctgtagcatccatgtttaatataaacaatgatcaattaacactagctgttt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atagctgtcctgtagcatccatgtttaatataaacaatgatcaattaacactagctgttt 395
Query: 294 tattaataaccatgatgaattcctttaaggaaaaattttaagacctcttatccatatgtt 353
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 394 tattaataaccatgatgaattcctttaaggaaaaattttaagacctcttgtccatatgtt 335
Query: 354 taactttctttttcaattccttgtctatcttctttccaaatgattgttttctgtacacaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 taactttctttttcaattccttgtctatcttctttccaaatgattgttttctgtacacaa 275
Query: 414 gagagtatgttaggagaacaacgtactggttattgattctgttgcttaaggtcactgggg 473
||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 274 gagagtatgttaggagaacaaagtactggttattgattctgttgcttaa---------gg 224
Query: 474 tcatttccacattggtggaaccattgtgtctgctgttttacagcattgttttgaagatga 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tcatttccacattggtggaaccattgtgtctgctgttttacagcattgttttgaagatga 164
Query: 534 aataaaatgatataaacagttatgcaaaaagcaagaaaatgtatagatgaagggaatagg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aataaaatgatataaacagttatgcaaaaagcaagaaaatgtatagatgaagggaatagg 104
Query: 594 aatgtagcctatggaatgcctttaccgcagtgtcactgttaaccacaattatcatcttca 653
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 103 aatgtagcctatggaatgcttttaccgcagtgtcactgttaaccacaattatcaccttca 44
Query: 654 ttctgtcaagtagttaattaaacactg 680
|||||||||||||| ||||||||||||
Sbjct: 43 ttctgtcaagtagtcaattaaacactg 17
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space: 716900
Effective search space used: 716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no301_c22.g1 MSMg01no301_c22.g1 CHROMAT_FILE:
MSMg01no301_c22.g1 PHD_FILE: MSMg01no301_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:31 2005
(519 letters)
>mm_chr16_77948357_77949275
Length = 919
Score = 835 bits (432), Expect = 0.0
Identities = 491/514 (95%), Gaps = 7/514 (1%)
Strand = Plus / Plus
Query: 1 tctttaaatacatttttggatactcatactaaacactatgaattatgtgttctgtctcct 60
|||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||
Sbjct: 201 tctttaaatacatttttggacactcatattaaacaccatgaattatgtgttctgtctcct 260
Query: 61 ataattttatgaacaataattctcaaaaataaggccactttaaaaggaatacatttaata 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ataattttatgaacaataattctcaaaaataaggccactttaaaaggaatacatttaaaa 320
Query: 121 catcccacaatggtacatgtgtgtgttctactgaaaaagtatcttttattcagcagatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catcccacaatggtacatgtgtgtgttctactgaaaaagtatcttttattcagcagatat 380
Query: 181 aactgtcctctcagaaacttactgctgaataaactcactttctggactctggctgcctga 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aactgtcctctcagaaacttactgctgaataaactcactttctgaactctggctgcctga 440
Query: 241 ttcaaccaactgtctagcccaaactcctctaccatctgtctgaatcaaactggttttccc 300
|||||||||||||||||||||||||||||||| ||||| |||||||||||||| || |||
Sbjct: 441 ttcaaccaactgtctagcccaaactcctctacaatctgactgaatcaaactggctt-ccc 499
Query: 301 ctgcactccaacttaattgctgtgcttggcctcaaataattaactctgacactctgtcct 360
||| | || ||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 500 ctgtattctaacttaattgctgtgcttggcctcaaatagttaactctgacaatctgtcct 559
Query: 361 aatcttctggctccttcttattctctggctgatttcgtcttcacctgtaaaattacctga 420
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 560 aatcttctggccccttcttattctctggctgattttgtcttcacctgtaaaattacctga 619
Query: 421 gtcaaaactctccctttctctct------ctctctctctctctctctctctctctctctc 474
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 620 gtcaaaactctccctttctttctttagcgctctctctctctctctctctctctctctctc 679
Query: 475 tctctctctctctctctctctctctctctctctc 508
||||||||||||||||||||||||||||||||||
Sbjct: 680 tctctctctctctctctctctctctctctctctc 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 129
Number of extensions: 49
Number of successful extensions: 49
Number of sequences better than 10.0: 1
Number of HSP's gapped: 45
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
