Query= MSMg01no302_o15.b1 MSMg01no302_o15.b1 CHROMAT_FILE:
MSMg01no302_o15.b1 PHD_FILE: MSMg01no302_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:40 2005
(237 letters)
>mm_chr16_46861373_46862010
Length = 638
Score = 422 bits (218), Expect = e-122
Identities = 230/234 (98%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 5 gaattcagagagattcaacgtcaagttgcttaggatatttt-agtccctttgagacatgg 63
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 205 gaattcagagagattcaacgtcaagttgcttacgatatttttagtccctttgagacatgg 264
Query: 64 tgtgacatagtcaggcattggaatagctatatcaagtatatatttcacactctaccaagc 123
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 tgtgacatagtcaggcattggaatagctatatcaagtatatctttcacactctaccaagc 324
Query: 124 tacttgagcaattgcccttctttgcctgttagcctcacctttccacaaatatcctacaaa 183
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatttgagcaattgcccttctttgcctgttagcctcacctttccacaaatatcctacaaa 384
Query: 184 tttgagcctctaagaacacaaaggctataaatgagttaagcaatcatactgact 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgagcctctaagaacacaaaggctataaatgagttaagcaatcatactgact 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no302_o15.g1 MSMg01no302_o15.g1 CHROMAT_FILE:
MSMg01no302_o15.g1 PHD_FILE: MSMg01no302_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:40 2005
(287 letters)
>mm_chr16_46880535_46881222
Length = 688
Score = 501 bits (259), Expect = e-146
Identities = 279/287 (97%), Gaps = 5/287 (1%)
Strand = Plus / Minus
Query: 1 ttataaagcatcctggattatggttgagtaagtcttagagttaacagttttaagtctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ttataaagcatcctggattatggttgagtaagtcttagagttaacagttttaagtctatg 354
Query: 61 tcttattgactcctgtcaactttaaataagaaaaagtatcattagtaggaagccagactt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 353 tcttattgactcctgtcaactttaaataagaaaaagtatcataagtaggaagccagactt 294
Query: 121 ccagaaagtgaacaggagagaaaatctattgcaagttctaaagttagc-ttttttttcaa 179
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 293 ccagaaagtgaacaggagagtaaatctattgcaagttctaaagttagctttttttttcaa 234
Query: 180 atgtagtttttaatcattattttctaatcatgaattg--gagagagagagagagagagag 237
||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 233 atgtagtttttaatcattattttctaatcatgatttggagagagagagagagagagagag 174
Query: 238 agagagagagagagagagagagagagagagagaga--gagagagaga 282
||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 173 agagagagagagagagagagagagagagagagagaatgagagagaga 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 106
Number of extensions: 38
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's gapped: 33
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
