Query= MSMg01no303_l24.b1 MSMg01no303_l24.b1 CHROMAT_FILE:
MSMg01no303_l24.b1 PHD_FILE: MSMg01no303_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:44 2005
(656 letters)
>mm_chr16_24081972_24083027
Length = 1056
Score = 1253 bits (648), Expect = 0.0
Identities = 651/652 (99%)
Strand = Plus / Plus
Query: 5 gaattccaagatcctcagcttgaaggaggcaacacaggggcccatcacaggtatgggttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagatcctcagcttgaaggaggcaacacaggggcccatcacaggtatgggttc 264
Query: 65 cagtctcaggcagcctacatcccgagccaagctttctcagctgtaactaactgtgtgcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagtctcaggcagcctacatcccgagccaagctttctcagctgtaactaactgtgtgcta 324
Query: 125 cttattgtctttcagccacagggtcgtcgtcgtctgtatgatggagacagtctacacacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttattgtctttcagccacagggtcgtcgtcgtctgtatgatggagacagtctacacacc 384
Query: 185 tgtatattaaagttaggtccggttcattcctcccagacccatgtctcaagaaatagggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtatattaaagttaggtccggttcattcctcccagacccatgtctcaagaaatagggtt 444
Query: 245 tagactcaaaatatatttacaaatactatgggcatattgctaggctcttctttgactaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 tagactcaaaatatatttacaaatactatgggcatattgctaggctcttctctgactaga 504
Query: 305 tataacttaaaatatcccatttatttcagcctacattctgccatgtggctggttacctgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tataacttaaaatatcccatttatttcagcctacattctgccatgtggctggttacctgt 564
Query: 365 gctcaggtaccacgccggtgtccatccagtcacatcttcccagtggatcttgagtctggc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gctcaggtaccacgccggtgtccatccagtcacatcttcccagtggatcttgagtctggc 624
Query: 425 tctatcccagaattctttctcctcttggatgttccaccttctatttcctgcctaagtcac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctatcccagaattctttctcctcttggatgttccaccttctatttcctgcctaagtcac 684
Query: 485 aggccataggctttttaactgacagatgatgcatccatacaatatacaaggtattatcat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aggccataggctttttaactgacagatgatgcatccatacaatatacaaggtattatcat 744
Query: 545 ctctccacgtgtggggaagtgtgagcacagcatgatcccccacaccacggagtatatgcc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctctccacgtgtggggaagtgtgagcacagcatgatcccccacaccacggagtatatgcc 804
Query: 605 taggaatgttagctcactcctcacaaaggaatgatctgaggggcctctggta 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taggaatgttagctcactcctcacaaaggaatgatctgaggggcctctggta 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no303_l24.g1 MSMg01no303_l24.g1 CHROMAT_FILE:
MSMg01no303_l24.g1 PHD_FILE: MSMg01no303_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:41:44 2005
(669 letters)
>mm_chr16_24127297_24128370
Length = 1074
Score = 1222 bits (632), Expect = 0.0
Identities = 662/674 (98%), Gaps = 5/674 (0%)
Strand = Plus / Minus
Query: 1 agacagatccaccgagtctgctgggaaagaaaggtctatagatgtggggctgagaggcag 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 agacagatccactgagtctgctgggaaagaaaggtctatagatgtggggctgagaggcag 815
Query: 61 ttctg----gcctctccatcttcacacctactttgagaaactttattttctaaaggaaaa 116
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 ttctgtcctgcctctccatcttcacacctactttgagaaactttattttctaaaggaaaa 755
Query: 117 acgcatgttgattattacaatcatgaagcataagaaggttaaattcttttcgattcatgc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 acgcatgttgattattacaatcatgaagcataagaaggttaaattcttttcgattcatgc 695
Query: 177 ctattttatttaccattttaagaagtgaggtcatatgtattcatatatacatatttgaac 236
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 694 ctattttatttaccattttaagaagtgaggtcatatgtattcatatgtacatatttgaac 635
Query: 237 atgggatttgagtgtatctgagatactgtttttaagaatatgaaattataacaccctaac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 atgggatttgagtgtatctgagatactgtttttaagaatatgaaattataacaccctaac 575
Query: 297 tttttctccttttctcattcttccttgctggggtccaggccccagctgctcacaggttcc 356
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 574 tttttctccttttctcattcttccttgctggcgtccaggccccagctgctcacaggttcc 515
Query: 357 caagagaagataacttagagagggaggagtgagtcaggcacagtgatcagtggtcaggag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 caagagaagataacttagagagggaggagtgagtcaggcacagtgatcagtggtcaggag 455
Query: 417 aatcttgcagctctgactgaccagcaatcaggtcacttctttctttatgcagatttcaca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 aatcttgcagctctgactgaccagcaatcaggtcacttctttctttatgcagatttcaca 395
Query: 477 gaacaaagataggctcctgattttccaagaattgtacattatgtgtttga-tttttcact 535
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 394 gaacaaagataggctcctgattttccaagaattgtacattatgtgtttgattttttcatt 335
Query: 536 acatgccctgggttacagattcagccacaattagaatgtgcaaacagaatagatttcatt 595
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 334 acatgccctgggttacagattcagccacaattagaacgtgcaaacagaatagatttcatt 275
Query: 596 attattgtcagccccgtaactccaactcaaagaatctaaagaatgtcttcaccaaaacaa 655
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 274 attattgtcagccccgtaactccaactcaaagaatctaaagaatgtctccaacaaaacaa 215
Query: 656 acacatttattcta 669
||||||||||||||
Sbjct: 214 acacatttattcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1074
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1064
Effective search space: 701176
Effective search space used: 701176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
