Query= MSMg01no304_n10.b1 MSMg01no304_n10.b1 CHROMAT_FILE:
MSMg01no304_n10.b1 PHD_FILE: MSMg01no304_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:00 2005
(649 letters)
>mm_chr16_10414173_10415220
Length = 1048
Score = 1120 bits (579), Expect = 0.0
Identities = 632/650 (97%), Gaps = 3/650 (0%)
Strand = Plus / Plus
Query: 1 agccatggntacaaagtgagaccctgcctcataacagacagacttactcagattcacagt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 agccatggctacaaagtgagaccctgcctcataacagacagacttactcagattcccagt 260
Query: 61 tctgtgctctgggttccggctttaggaaaggtgtggtagccaggagctgtgcaggttctg 120
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tctgtgctctgggttccagctttaggaaaggtgtggtagccaggagcagtgcaggttctg 320
Query: 121 tctagcgctgtccacatcactgctgatccccccggctggttaccaggccctctctctgcc 180
||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 321 tctagtgctgtccacatcactgctgatgccct-ggctggttaccaggccctctctctgcc 379
Query: 181 tccgttttctcatctataaaatgggtctcagaggcctgggtgagaggctgccgttacggt 240
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 tccattttctcatctataaaatgggtctcagaggcctgggtgagaggctgccattacggt 439
Query: 241 gcaagcacaatgcctaccacacagtccgagtcctggttttgtcctggcagccatcttcat 300
||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 440 gcaagcacagtgcctaccacacagtccgagtcctggcaatgccctggcagccatcttcat 499
Query: 301 taccagtgcacgttgctgcctggagttcagagggtgattgcttttagagttgtgttgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taccagtgcacgttgctgcctggagttcagagggtgattgcttttagagttgtgttgcag 559
Query: 361 cctgcccagcccacagcacagggcaggttaagtgtgttcatctgttcattgttctgttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cctgcccagcccacagcacagggcaggttaagtgtgttcatctgttcattgttctgttgg 619
Query: 421 gggacagtctcttgccaccagagggttaaatttgcattgcccagtacagtggaacctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggacagtctcttgccaccagagggttaaatttgcattgcccagtacagtggaacctttt 679
Query: 481 tttattgcagtctgcattttttataaggcgcgggggctggagctgtgggctggagtagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttattgcagtctgcattttttataaggcgcgggggctggagctgtgggctggagtagtg 739
Query: 541 gagctttgtctaacaagtgcaaggcccctgcttcatccccagaagcagctccccctcccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gagctttgtctaacaagtgcaaggcccctgcttcatccccagaagcagctccccctcccc 799
Query: 601 ccactaacatcaagaacaacaaacccctaaaa-caacaaaaatggatggt 649
|||||||||||||||||||||||||| ||||| ||||||||| |||||||
Sbjct: 800 ccactaacatcaagaacaacaaaccc-taaaaacaacaaaaacggatggt 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1048
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1038
Effective search space: 663282
Effective search space used: 663282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no304_n10.g1 MSMg01no304_n10.g1 CHROMAT_FILE:
MSMg01no304_n10.g1 PHD_FILE: MSMg01no304_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:44:01 2005
(486 letters)
>mm_chr16_10614177_10615062
Length = 886
Score = 880 bits (455), Expect = 0.0
Identities = 476/483 (98%)
Strand = Plus / Minus
Query: 1 cctgagaaattggaatgaggctaaagaagagcactgtaggtgtcagcctcagaggccagg 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cctgagaaattgtaatgaggctaaagaagagcactgtaggtgtcagcctcagaggccagg 624
Query: 61 agggaacctccttcccaaagtgccctccctttgcatcagtgaggaggaaggatgctacag 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 623 agggaacctccttcccaaagtgccctccctttgcatcagtgaagaggaaggatgctacag 564
Query: 121 agccagcactgtgtcacatactcaggcaggtaaggagcacgcgtacctttgttatgagac 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 563 agccagcactgtgtcacatactcaggcaggtaaggagcacacgtacctttgttatgagac 504
Query: 181 atggcatacaggaggcagagcacgaagagggcgtgatagtcatcgtcagggctgtccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atggcatacaggaggcagagcacgaagagggcgtgatagtcatcgtcagggctgtccagg 444
Query: 241 gcatggtacaccatatccaggaagggtctggaaaagaggttttctctgtaagcctctgga 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 443 gcatggtacaccatatccaggaagggtctggaaaagaggaaatctctgtaagcctctgga 384
Query: 301 acagtgtgcatttccctctctcatctgacaacatcttgtctttgcttctcacaggtctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 acagtgtgcatttccctctctcatctgacaacatcttgtctttgcttctcacaggtctaa 324
Query: 361 ggctactagcttgcggtgaatgcactatgtgtctggtccagaatcaggcactgggaacac 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ggctactagcttgtggtgaatgcactatgtgtctggtccagaatcaggcactgggaacac 264
Query: 421 atccacacaaatgagagatgggctctgaccttggaaagctgctattggggtgggggtggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atccacacaaatgagagatgggctctgaccttggaaagctgctattggggtgggggtggg 204
Query: 481 ggg 483
|||
Sbjct: 203 ggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
