Query= MSMg01no306_k07.b1 MSMg01no306_k07.b1 CHROMAT_FILE:
MSMg01no306_k07.b1 PHD_FILE: MSMg01no306_k07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:30 2005
(639 letters)
>mm_chr16_91773126_91774164
Length = 1039
Score = 1017 bits (526), Expect = 0.0
Identities = 526/526 (100%)
Strand = Plus / Minus
Query: 114 acagcaatgagtctagagacctgaggagagggtggggagccctattaacggccaaagaaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 acagcaatgagtctagagacctgaggagagggtggggagccctattaacggccaaagaaa 980
Query: 174 acaaaacggttctcttctgaatggaacacaaagtatatgctttgagaaatttctaaaacc 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 acaaaacggttctcttctgaatggaacacaaagtatatgctttgagaaatttctaaaacc 920
Query: 234 gtaaacatgcaagcttcaaatttctgggcagagagcattgctagggatcaagccccaggc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 gtaaacatgcaagcttcaaatttctgggcagagagcattgctagggatcaagccccaggc 860
Query: 294 cttgaacatgctaggccagctacatattagcctgggcttagagatcttgagcgaggcaaa 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 cttgaacatgctaggccagctacatattagcctgggcttagagatcttgagcgaggcaaa 800
Query: 354 cacgcctatatctacgtaaacaaaacagaaaacaaataatctaaatactagaactgggta 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 cacgcctatatctacgtaaacaaaacagaaaacaaataatctaaatactagaactgggta 740
Query: 414 aacagtgcttttcaaagtttggatgacgttaaaattattaagccatttctagaatatgtc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aacagtgcttttcaaagtttggatgacgttaaaattattaagccatttctagaatatgtc 680
Query: 474 tgagaagtctttaatcttctcattttagctttggaaagaagggctaattactgaaagtta 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tgagaagtctttaatcttctcattttagctttggaaagaagggctaattactgaaagtta 620
Query: 534 aaaggataaatactgatctatgagttctggtatttacactaaagttccaaatgttgataa 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaaggataaatactgatctatgagttctggtatttacactaaagttccaaatgttgataa 560
Query: 594 tactacttataaaataccatttgtaatggtaaaaacatattgaaat 639
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tactacttataaaataccatttgtaatggtaaaaacatattgaaat 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_k07.g1 MSMg01no306_k07.g1 CHROMAT_FILE:
MSMg01no306_k07.g1 PHD_FILE: MSMg01no306_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:30 2005
(582 letters)
>mm_chr16_91617413_91618394
Length = 982
Score = 998 bits (516), Expect = 0.0
Identities = 563/580 (97%), Gaps = 4/580 (0%)
Strand = Plus / Plus
Query: 1 cttaacagcgatctacaaaacagcaaagagcagttggatacacttgtactaccagtcatt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cttaacagtgatctacaaaacagcaaagagcagttggatacacttgtactatcagtcatt 260
Query: 61 ttcttttcatcaataaccaggtaagggtgtgggttccatgtccttagtaagctttggttc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ttcttttcatcaataaccaggtaagggtatgggttccatgtccttagtaagctttggttc 320
Query: 121 ttgggggcaagagagtgggttgaggtgtggttcccagcacccacatggcagctaacaaat 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 ttgggggcaagagaatgggttgaggtgtggttcccagcacccacatggcagctaataaat 380
Query: 181 gtccctcactctggttccagggggtcagatgccttcttctggcccactcaggcactggac 240
||| |||||||||||||||||||||| || || ||||||||||||||||||| |||||
Sbjct: 381 gtctctcactctggttccagggggtc---tgactccttctggcccactcaggcattggac 437
Query: 241 acacatggtgcacagccatagtgtaggcaaaacaccatatgtatataaaaaagatagtca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 438 acacatggtgcacagccatagtgtaggcaaaacaccatatgtatataaaaaagaaagtca 497
Query: 301 gttctttgtaacaatgttgctaaacaagaatatataagtatctatgacttatcttggtgc 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 498 gttctttgtaacaatgttgctaaacaagaatatataagtatctatgacttttcttggtgc 557
Query: 361 agctagaaaatggacagtgatgtttggctatcacatagtgtgacaggacctgaagtctac 420
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 558 agctagaaaat-gacagtgatgtttggctatcacatagtgtgacaggaactgaagtctac 616
Query: 421 tgcttgaagacagggtttctctctgtgtagccctggttgttctggactcactttggagac 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 617 tgcttgaagacagggtttctctctgtgtagctctggttgttctggactcactttggagac 676
Query: 481 caggctggcttcaaacatagagagatccacctgcccctgccttccatgttctgggattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 caggctggcttcaaacatagagagatccacctgcccctgccttccatgttctgggattaa 736
Query: 541 agacatgcatacctccgcccggatccaatgcacagaattt 580
||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 agacatgcatacctccgcccggatccaatgcacagaattt 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
