NGGGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCGAAACTTCTCAGAGGGTGTAGAATTGCTAAGGCCCCGA
GAGCTGTGGTGTGTTTGTTGTTGGTAGTTCAGGGGGTTGTGTGTGTTTTG
TTGGTAGTCATGCTCAAGGAAGAAACAAAAGGAAAGAAATTAATACGGGG
ATCTCTCGCACCTCTATTCTCTCTCTGTATCTAGTGATAGGGGATGAAAC
GGGGTGGGGGTGGAATAAAGGGTGAAGAAGAACCCACAAAGTAGCAAAGA
CTGGCTACAAACAACCACTTGAGTCTATTGTTTGAATCATTACTTTTCTT
TCAAAGAAATAATAGATTTTTTTTTTTTTTTTTGGACAGGGTTTCTATGT
ATAGCTCTGGCCGTCCTGGAACTCACTTAGTAGCCCAGGCTGGCCTGGAA
CTCTGAAATCTGCCTGCCTCTGCCTCTTCCTCCCAAGTGCTGGGATTAAA
GGCGTGCGCCCCCACACCGGGTTCAAGAACAGATTGTTAATTGACTATAG
TAAGTTAAAAAAAGTTTTCCAAAGCTATTAGTTTGTTAAAACCCCACGGT
TAAACGGAAATTACCGAATCCTTTTTCGAATTTAGGGCGAAAATAAAATG
GGGCAAAGGGTTCTCTGTGGAACGTCTTTTAAAATACCCCCAAATTTGGG

CGAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCCTAGGAATAACAGCTACCATG
TAAGAGACAGGAACAAGACAATGTGCACCTGACTCCACGTGCATACGCAT
TGGCAGTTATCCACGCCCTGGTCTATTGCTTGGGCACTAATGCTATCCCT
GGCCACAACTGGGACAACCTCAAATCATCTGCCCATTTAAACTTTCCCGA
AGTCTTCAGCATTTGCATGCATTATGCTTCTAGGCAGCAAGACTTATATG
GAAAATCCCTTTCAAAGATTTATCCTTTATTAAATCAAAAAAATTATTTG
TTAAGACATTTTTAAATAAAAAATTAAACCAGTCTTTTGGAAACTTCACA
AAACTTAAATTTTACTTATAACTTAAAGAGGTGGGATTGTTCAGTTTTGT
GCGGAATCTAATTCTCAGTAAATTATAAACTTCTAATAACGTGTGTCATA
TACATTGAAGGAATGCATTATTTTGTACATATTCCTTGGTATAAATGGCC
AATTTGTATCCATCACAAAGCAAAGGTGAAGAGCTGGGAAACCATCGCAT
GAAATTATGGCCAGCTTAATAGCAGGTTTTCCACTAAATTACCCAGATGA
ACACAGACCTGGACCAACTACATCCCACAGCAGCTCATGTGAGTAATTTC
CCATGCGTCCGGN

Query= MSMg01no306_n04.g1 MSMg01no306_n04.g1 CHROMAT_FILE:
MSMg01no306_n04.g1 PHD_FILE: MSMg01no306_n04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:43 2005
         (600 letters)



>mm_chr16_72885462_72886461
          Length = 1000

 Score =  909 bits (470), Expect = 0.0
 Identities = 491/498 (98%), Gaps = 1/498 (0%)
 Strand = Plus / Minus

                                                                        
Query: 103  cttgggcactaatgctatccctggccacaactgggacaacctcaaatcatctgcccattt 162
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1000 cttgggcactaatgctatccctggccacaactgggacaacctcaaatcatttgcccattt 941

                                                                        
Query: 163  aaactttcccgaagtcttcagcatttgcatgcattatgcttctaggcagcaagacttata 222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  aaactttcccgaagtcttcagcatttgcatgcattatgcttctaggcagcaagacttata 881

                                                                        
Query: 223  tggaaaatccctttcaaagatttatcctttattaaatcaaaaaaattatttgttaagaca 282
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 880  tggaaaatccctttcaaagatttatcctttattaaatc-aaaaaattatttgttaagaca 822

                                                                        
Query: 283  tttttaaataaaaaattaaaccagtcttttggaaacttcacaaaacttaaattttactta 342
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 821  tttttaaataaaaaattaaatcagtcttttggaaacttcacaaaacttaaattttactta 762

                                                                        
Query: 343  taacttaaagaggtgggattgttcagttttgtgcggaatctaattctcagtaaattataa 402
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 761  taacttaaagaggtgggattgttcagttttgtgtggaatctaattctcagtaaattataa 702

                                                                        
Query: 403  acttctaataacgtgtgtcatatacattgaaggaatgcattattttgtacatattccttg 462
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 701  acttctaataacgtgtgtcatatacattgaaggaatgcatcattttgtacatattccttg 642

                                                                        
Query: 463  gtataaatggccaatttgtatccatcacaaagcaaaggtgaagagctgggaaaccatcgc 522
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 641  gtataaatggccaatttgtatccatcacaaaacaaaggtgaagagctgggaaaccatcgc 582

                                                                        
Query: 523  atgaaattatggccagcttaatagcaggttttccactaaattacccagatgaacacagac 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 581  atgaaattatggccagcttaatagcaggttttccactaaattacccagatgaacacagat 522

                              
Query: 583  ctggaccaactacatccc 600
            ||||||||||||||||||
Sbjct: 521  ctggaccaactacatccc 504


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1000
Length adjustment: 10
Effective length of query: 590
Effective length of database: 990
Effective search space:   584100
Effective search space used:   584100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)