Query= MSMg01no307_e13.b1 MSMg01no307_e13.b1 CHROMAT_FILE:
MSMg01no307_e13.b1 PHD_FILE: MSMg01no307_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:17 2005
(604 letters)
>mm_chr16_58422916_58423919
Length = 1004
Score = 1056 bits (546), Expect = 0.0
Identities = 591/610 (96%), Gaps = 12/610 (1%)
Strand = Plus / Minus
Query: 1 taatcattacaggcatggatggtggtaacagaattcccctcatgttattacctaacaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taatcattacaggcatggatggtggtaacagaattcccctcatgttattacctaacaatg 745
Query: 61 tactatgcatttcattcactagaacaaattaaacgttacaacagcttagtagtatagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tactatgcatttcattcactagaacaaattaaacgttacaacagcttagtagtatagggc 685
Query: 121 tggtaagaggtggggcaaggaagtatgcagtcactgacagcaatagagtaacttcaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tggtaagaggtggggcaaggaagtatgcagtcactgacagcaatagagtaacttcaattt 625
Query: 181 accaaaaggcagtttcatgtccacaaagcagcaacagtccccacgcagcccttgaccgtc 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 624 accaaaaggcagtttcatgtccacaatgcagcaacagtccccacgcagcccttgacggtc 565
Query: 241 ctgaatttgc-----tgngtcttcggctggggttttactctctgacccacgttagtacta 295
||||| || || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgaa---gcagcagtg-g-cttcggctggggttttactctctgacccacgttagtacta 510
Query: 296 catgctgctctacttttgagttggatactataaattctgctttctgaacacccacttctc 355
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 509 catgctgctctacttttgagttggatactataaattctgctttctgaacaaacacttctc 450
Query: 356 atataaagtttagctttcagtcaacactacactttatttccgacccctgatttcattcat 415
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 449 atataaagtttagctttcagtcaacactatactttatttccgacccctgatttcattcat 390
Query: 416 gcacgagaactaggcatactgggttaataatataaaaaatatggagagaatgaagtaaat 475
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gcacgagaactaggcatagtgggttaataatataaaaaatatggagagaatgaagtaaat 330
Query: 476 gtgggtgtgaaatacacccactgattttacagcaaaacaggctcttacataataaaaaaa 535
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 329 gtgggtgtgaaatacacccactgattttacagtaaaacaggctcttacataataaaaaaa 270
Query: 536 taccatttccttctc-aagctaccataaaattccctctcgctgcctctctctgtccctct 594
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 taccatttccttc-caaagctaccataaaattccctctcgctgcctctctctgtccctct 211
Query: 595 tggatctaac 604
||||||||||
Sbjct: 210 tggatctaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_e13.g1 MSMg01no307_e13.g1 CHROMAT_FILE:
MSMg01no307_e13.g1 PHD_FILE: MSMg01no307_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:17 2005
(369 letters)
>mm_chr16_58318111_58318878
Length = 768
Score = 656 bits (339), Expect = 0.0
Identities = 361/373 (96%), Gaps = 9/373 (2%)
Strand = Plus / Plus
Query: 1 aatatgaactaaacagatagaaagggcataaaccccc----aactcttatcatttcaatt 56
|||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 aatatgaactaaacagatagaaagggcataaa-----tatgaactcttatcatttcaatt 255
Query: 57 accacaacattcccagacacacagaaaacctaccacaatgttagcaatggtctttgttgc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 accacaacattcccagacacacagaaaacctaccacaatgttagcaatggtctttgttgc 315
Query: 117 aatcacaaatttcacctatttttgttgtgttttctcatatctattattttataaccagaa 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aatcacaaatttcacctatttttgttgtgttttctcatatctattattttataaccagaa 375
Query: 177 aactgtttataaaattaatgaattatttataaaaagaaataattgagtctctcaggaaat 236
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 376 aactgtttataaaattaatgaattatttataaaaagaaataatcgagtctctcaggaaat 435
Query: 237 attttagattccactgacttattctacaaacagcaatgaaaaagtttaatctaagaatgc 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 attttagattccactgacttattctacaaacagcaatgaaaaagtttaatctaagaatgc 495
Query: 297 tcagatgaccttacccaccaccagaatttcagaatccagcatcattaagccccacacctc 356
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 496 tcagatgaccttacccaccaccagaatttcagaatccagcatcattaaggcccacacctc 555
Query: 357 ccaaagactgatt 369
|||||| ||||||
Sbjct: 556 ccaaaggctgatt 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 768
Length adjustment: 9
Effective length of query: 360
Effective length of database: 759
Effective search space: 273240
Effective search space used: 273240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
