Query= MSMg01no307_h08.b1 MSMg01no307_h08.b1 CHROMAT_FILE:
MSMg01no307_h08.b1 PHD_FILE: MSMg01no307_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:31 2005
(688 letters)
>mm_chr16_59185648_59186731
Length = 1084
Score = 1265 bits (654), Expect = 0.0
Identities = 675/688 (98%), Gaps = 12/688 (1%)
Strand = Plus / Plus
Query: 5 gaattccagttattacc----gtcaagactaacagacgaacacacagtctatttgtcatg 60
|||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtta----caaaggtcaagactaacagacgaacacacagtctatttgtcatg 260
Query: 61 atcactgggtacagtaagggtttgcatatggctgcatagcgatcgtaggccattgctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcactgggtacagtaagggtttgcatatggctgcatagcgatcgtaggccattgctgcc 320
Query: 121 aagagaaaacattccatagttgcacacatcacaaatgaaaagaactgtatcatgcattca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagaaaacattccatagttgcacacatcacaaatgaaaagaactgtatcatgcattca 380
Query: 181 gaaagagagatcagtttgctcttagctgtgaaggtgaggagcatctttggtgtcactgtg 240
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ga----gagatcagtttgctcttagctgtgaaggtgaggagcatctttggtgtcactgtg 436
Query: 241 gatgataaccaagtatcaacaagagctaaacacccaagaaataggtacatgggtatttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gatgataaccaagtatcaacaagagctaaacacccaagaaataggtacatgggtatttga 496
Query: 301 aggcgagggtcattccagatgagaatgatcagaccaaggttccccacaatggtgataaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggcgagggtcattccagatgagaatgatcagaccaaggttccccacaatggtgataaga 556
Query: 361 tagatgaccaagaacagcaggaacagggggattttccattgtggctggtgactgagtccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagatgaccaagaacagcaggaacagggggattttccattgtggctggtgactgagtccc 616
Query: 421 gtgagaacaaattctgtcagcagtgttgtgttctctgttcccatatcctcacttagatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtgagaacaaattctgtcagcagtgttgtgttctctgttcccatatcctcacttagatgt 676
Query: 481 cccttaaatgaaaggcaacaaatgttagacagtatttaataaagacttgtaaagggaaat 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 cctttaaatgaaaggcaacaaatgttagacagtatttaataaagacttgtaaagggaaat 736
Query: 541 ttggtaatggacttgaaatgtaacaatatatttatcagaatgacctttgttccatttgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ttggtaatggacttgaaatgtaacaatatatttatcagaatgacctttgttccatttgaa 796
Query: 601 taaactaaatggaaactactcttgaaattgaagaaatagttttaattcattgatataatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 taaactaaatggaaactactcttgaaattgaagaaatagttttaattcattgatataatt 856
Query: 661 ttaacatgcaaaagttaatagattttta 688
||||||||||||||||||||||||||||
Sbjct: 857 ttaacatgcaaaagttaatagattttta 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1084
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1074
Effective search space: 728172
Effective search space used: 728172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_h08.g1 MSMg01no307_h08.g1 CHROMAT_FILE:
MSMg01no307_h08.g1 PHD_FILE: MSMg01no307_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:31 2005
(655 letters)
>mm_chr16_59369954_59371008
Length = 1055
Score = 319 bits (165), Expect = 4e-91
Identities = 261/323 (80%), Gaps = 47/323 (14%)
Strand = Plus / Minus
Query: 380 agcaagcacttcttggcatcaacaacagtgccagggtttggtgtctgcagatgggatgga 439
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 agcaagtacttcttggcatcaacaacagtgccagggtttggtgtctgcagatgggatgga 952
Query: 440 tccctaggttgggtggaaagacagagaacagcgattgaaggaaaggtcctcaacttaaat 499
||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |
Sbjct: 951 tccctaggttgggtggaaagacagagaacagagattgaaggaaagatcatcaacttaatt 892
Query: 500 tt-----------------------------------caac------------agtatgc 512
|| |||| |||||||
Sbjct: 891 tttttgtttgttttttgtttgttttttcgagcactatcaacttaatttttaacagtatgc 832
Query: 513 tgttactaatactttatatgcaagtataaccacatgaatgcttagaaggcaggaaatgca 572
||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||| |
Sbjct: 831 tgttactaatactttattttcaagtgtaaccatatgaatgcttagaaggcaggaaatgga 772
Query: 573 tagatattatgtgtattcccagatatcatagagattgaagtaatttgttatccttgtgct 632
||||||||||||| ||||||||| ||||| |||||||||| |||||||| ||||||||||
Sbjct: 771 tagatattatgtgcattcccagaaatcatcgagattgaagcaatttgttttccttgtgct 712
Query: 633 tttacatcattttattgccttta 655
|||||||||||||||||||||||
Sbjct: 711 tttacatcattttattgccttta 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
