TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGAGACCGCGGA
ATTCATACTTTTCCAGAAAATTTTTCTATCTAAAACTACACTTCTGTAAA
AATGTAATTCAGAGCATTTATCCCTTCCAGAGATGAGGTAAATTTAATCA
TTTTCCTTCTGGATGAAAGACCCTGGTATAATTTTTACTTTTTGGTACAG
TGTTCAATAGGAGTGGTTATACTGCTTAATGGGCTGTAGTTTTCAAAGCA
GTACTGAGAGTAAGAATGGTATCACAAAATATATCCATCAAAAACATATT
ACTAGTAAATATTTGGTCTTGTTTTCTGCTGTGGTACAGCAGAGCTGAGA
CTGTATAAGATTATGTTGTCTCGCCCCCCCACAGGAAGCCTGGGTTCCGA
CCCTTGGATCCTAGAAACACAATGTGAATAGAATACAGATTCTAGCATGG
ACAACAAATAGTACATAAAAGTCAGATGCACTTAATTCAAACCTTTTAAA
TGCCCATCTCACTACCTACTATGGGGAATATGTGGAAGGCAATGTGACCC
AATGTTAGCTAAGAATCCTAAGTTTATGTGGGTTCAAGACACACTTGTAC
AATTTTCCGTTTCTGGAACAAGTGATATTCCTCTTTTCTGTTACAATAGA
GATGATATGGGTATCTACCAGAGTGATTCATTGTGGTTCTACTGGGAGTT
GCATGAACTAATAN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATTTGGGTATTTAGGTCATAATTG
GCTATGTACTTGGGGAAAAGTGGAGGAAGAAAGTTGGCTGTCAGAAAAAG
AAAAAAAAACGAAAAAATTATCTCAATATCACAGATATTCTCTTCAAATA
TCAGATTTTCAGTGTGAAATTTTGAGTTCTAATTTCCAGTTCAGAACAGA
ATTTATGAAAGCCATGTATTTTGAACATGGGAGAAGGGCAGAGAGATGAT
TTTTTTCAAAAGTGGAAAAAAATCCTCTAAAATACAAAGTTTTGGACAAT
CCAATGGCAACTATATTATGTCCACAGACATACTGGCACTTTGGCTAAAT
GTGAAGTAGGAGGAAAGCAACGCATTCTTATAAACTGAGTACAAACTATT
AAACACAAATACACTGAAAGGATAGGACATCCATTTAAAGGCTTCATTTT
TAAACTTAACATGAAAAATTTACATTTACATCTTAGAATTGCTTTTTATG
TTCTGTCATTTAATTTTGTTAGTATCATAATCCACAATTTAATCTTATAT
ATAAGGAGTATATACACAGTTTGACTCTATACTTTGTACCATGAGAACTG
CAGGGAATAAAATATAAGAATACTTATATGAATTCTTATATCTCACTGCG
GAACTGGAACCTGTTC

Query= MSMg01no308_b21.b1 MSMg01no308_b21.b1 CHROMAT_FILE:
MSMg01no308_b21.b1 PHD_FILE: MSMg01no308_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:21 2005
         (277 letters)



>mm_chr16_57862455_57863131
          Length = 677

 Score =  513 bits (265), Expect = e-150
 Identities = 274/277 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   acagattctagcatggacaacaaatagtacataaaagtcagatgcacttaattcaaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagattctagcatggacaacaaatagtacataaaagtcagatgcacttaattcaaacct 260

                                                                       
Query: 61  tttaaatgcccatctcactacctactatggggaatatgtggaaggcaatgtgacccaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaatgcccatctcactacctactatggggaatatgtggaaggcaatgtgacccaatg 320

                                                                       
Query: 121 ttagctaagaatcctaagtttatgtgggttcaagacacacttgtacaattttccgtttct 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ttagctaagaatcctaagtctatgtgggttcaagacacacttgtacaattttctgtttct 380

                                                                       
Query: 181 ggaacaagtgatattcctcttttctgttacaatagagatgatatgggtatctaccagagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaacaagtgatattcctcttttctgttacaatagagatgatatgggtatctaccagagt 440

                                                
Query: 241 gattcattgtggttctactgggagttgcatgaactaa 277
           ||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gattcattgtggttctattgggagttgcatgaactaa 477


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space:   179024
Effective search space used:   179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no308_b21.g1 MSMg01no308_b21.g1 CHROMAT_FILE:
MSMg01no308_b21.g1 PHD_FILE: MSMg01no308_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:21 2005
         (323 letters)



>mm_chr16_58024973_58025695
          Length = 723

 Score =  586 bits (303), Expect = e-172
 Identities = 318/323 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gcactttggctaaatgtgaagtaggaggaaagcaacgcattcttataaactgagtacaaa 60
           ||||||||||||||||||||||||||||||||||| | |||||||||| |||| ||||||
Sbjct: 523 gcactttggctaaatgtgaagtaggaggaaagcaatgtattcttataatctgattacaaa 464

                                                                       
Query: 61  ctattaaacacaaatacactgaaaggataggacatccatttaaaggcttcatttttaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ctattaaacacaaatacactgaaaggataggacatccatttaaaggcttcatttttaaac 404

                                                                       
Query: 121 ttaacatgaaaaatttacatttacatcttagaattgctttttatgttctgtcatttaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttaacatgaaaaatttacatttacatcttagaattgctttttatgttctgtcatttaatt 344

                                                                       
Query: 181 ttgttagtatcataatccacaatttaatcttatatataaggagtatatacacagtttgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ttgttagtatcataatccacaatttaatcttatatataaggagtatatacacagtttgac 284

                                                                       
Query: 241 tctatactttgtaccatgagaactgcagggaataaaatataagaatacttatatgaattc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tctatactttgtaccatgagaactgcagggaataaaatataagaatacttatatgaattc 224

                                  
Query: 301 ttatatctcactgcggaactgga 323
           ||||||||||||| |||||||||
Sbjct: 223 ttatatctcactgtggaactgga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)