Query= MSMg01no308_p18.b1 MSMg01no308_p18.b1 CHROMAT_FILE:
MSMg01no308_p18.b1 PHD_FILE: MSMg01no308_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:27 2005
(314 letters)
>mm_chr16_29883912_29884625
Length = 714
Score = 447 bits (231), Expect = e-130
Identities = 264/275 (96%)
Strand = Plus / Plus
Query: 5 gaattcagtgcaatttcctctcttttaaataggtggtactgagggctcttttcaacctga 64
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgcaaattcctctcctttaaataggtggtactgagggctcttttcaacctga 264
Query: 65 gagactactttggcccctgacccatgagatgccttgatggtttctctctcgctgcggcat 124
|||||||| || |||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 265 gagactacaaaggtacctgacccgtgagatgccttgatggtttctctctcgctgtggcat 324
Query: 125 ccatctccatgagcttgtctatgtggcttgtctatacggctcacatagccagccatcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatctccatgagcttgtctatgtggcttgtctatacggctcacatagccagccatcttg 384
Query: 185 actaagctaagactttcttttcttttttctgtcttccttccttccttccttccttccttc 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actaagctaaggctttcttttcttttttctgtcttccttccttccttccttccttccttc 444
Query: 245 cttccttccttccttccttccttccttccttcctt 279
||||||||||||||||||||| |||||||||||||
Sbjct: 445 cttccttccttccttccttccctccttccttcctt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_p18.g1 MSMg01no308_p18.g1 CHROMAT_FILE:
MSMg01no308_p18.g1 PHD_FILE: MSMg01no308_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:27 2005
(250 letters)
>mm_chr16_30050630_30051278
Length = 649
Score = 406 bits (210), Expect = e-118
Identities = 240/250 (96%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 1 agtgcagccgctgcaacccctgacctctgggctgctgccagcagttctcccgcctttctc 60
||||||| |||||||||||||||||||||||||| ||||||||| ||||| |||||||||
Sbjct: 411 agtgcag-cgctgcaacccctgacctctgggctgttgccagcagctctccagcctttctc 353
Query: 61 ccgtgccatcacagcgacatgatgtcatttttattgaggcaagattagatttagaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ccgtgccatcacagcgacatgatgtcatttttattgaggcaagattagatttagaaaaaa 293
Query: 121 aatttttttcagaagcatatttcacatgatatttggaccttgcttgaagaactgtcgatt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 292 aatttttttcagaagcatatttcacatgatatctggaccttgcttgaagaattgtcgatt 233
Query: 181 tcaattgacttcagcttttcccaccaaaagaagatacacataccacacacacacacacac 240
|||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 232 tcaattgacttcagcttttcccaccaaaagaatatacacataccacacatacacacacat 173
Query: 241 acacacacac 250
||| ||||||
Sbjct: 172 acaaacacac 163
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
