Query= MSMg01no309_g15.b1 MSMg01no309_g15.b1 CHROMAT_FILE:
MSMg01no309_g15.b1 PHD_FILE: MSMg01no309_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:59 2005
(320 letters)
>mm_chr16_26528294_26529013
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 5 gaattcaggacagctgtctttcatcatcaccattttcctcccggtcacctacctgtgctg 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 520 gaattcaggacagctgtctttcatcatcacaattttcctcccggtcacctacctgtgctg 461
Query: 65 acgttgtgaggaaatacacagagaaagaaaccatggtacattcctggaccatgcagacat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 acgttgtgaggaaatacacagagaaagaaaccatggtacattcctggaccatgcagacat 401
Query: 125 caagagtctcacagagaagggagataaaaggagtaatgagcatggttttaatgtcagcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 caagagtctcacagagaagggagataaaaggagtaatgagcatggttttaatgtcagcag 341
Query: 185 aaacagagcagtggtactcgcagcatctctgtgctggtagattgtatctccattcagtcg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaacagagcagtggtactcgcagcatctctgtgctggtagattgtatctccattcagtcg 281
Query: 245 ctatgcctctagctagcccccggctgcacagtcatgcgctattagacaagaattacttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 280 ctatgcctctagctagcccccggctgcacagtcatgcgctattagacaagaattatttat 221
Query: 305 tccttgtattcggttg 320
||||||||||||||||
Sbjct: 220 tccttgtattcggttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_g15.g1 MSMg01no309_g15.g1 CHROMAT_FILE:
MSMg01no309_g15.g1 PHD_FILE: MSMg01no309_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:59 2005
(626 letters)
>mm_chr16_26379635_26380660
Length = 1026
Score = 1149 bits (594), Expect = 0.0
Identities = 618/626 (98%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 1 catcccatcaccctgacaacctggcattgggactcacagtgtggaatgagacatggtaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 catcccatcaccctgacaacctggcattgggactcacagtgtggaatgagacatggtaga 261
Query: 61 aagaaaaaaaaatcaattccacaagttgtactctggcctctccatgcatattacagcatg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aagaaaaaaaa-tcaattccacaagttgtactctggcctctccatgcatattacagcatg 320
Query: 121 tacatggagacatgcacagcatatacatacatgaacatgtacacacacaacacacacaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacatggagacatgcacagcatatacatacatgaacatgtacacacacaacacacacaca 380
Query: 181 aagcaataaaatgtaattcataagaagtcagtagtaacagcacaatctgataagatttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcaataaaatgtaattcataagaagtcagtagtaacagcacaatctgataagatttgt 440
Query: 241 atttcaacctaattgattggaagggtggggaatggcctagggagggtactggagaaaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttcaacctaattgattggaagggtggggaatggcctagggagggtactggagaaaagt 500
Query: 301 cgggcagtgggcagagcatccctgttaggatgctagtggggtccacacgagacatgcagg 360
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 501 tgggcagtgggcagagcatccctgttaggatgctagtgaggtccagacgagacatgcagg 560
Query: 361 aagaggccatgtactggctagttttgtgtcaacttgacacagctggagatatcacagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagaggccatgtactggctagttttgtgtcaacttgacacagctggagatatcacagaga 620
Query: 421 aaggagcttcagttgatgaaatgcctccaagagatccaactgtaaggcattttctcaatt 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggagcttcagttgaggaaatgcctccaagagatccaactgtaaggcattttctcaatt 680
Query: 481 agtgatcaagggggaaaggccccttgtgggtggtgccatctctaggctggtagtcttgga 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 681 agtgatcaagggggaaaggccccttgtgggtggtgccatctctgggctggtagtcttgga 740
Query: 541 ttctagaagagagcaggctgaacaagccaggggaggcaagccagtaaagaacatccctcc 600
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 ttctataagagagcaggctgaacaagccaggggaggcaagccagtaaagaacatctctcc 800
Query: 601 atggcctctgcatcagctcctgctcc 626
||||||||||||||||||||||||||
Sbjct: 801 atggcctctgcatcagctcctgctcc 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
