CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACATTATCTCTCCACGAATCCAGCCCTTCAAAGGGTAATAACAG
AAAAAAACCAATACAAGAACGGGAACAATGCCCTAGAAAAAACAAGAAGG
TAATCCCTCAACAAACCTAAAAGAAGACAGCCACAAGAACAGAATGCCAA
CTTTAACAACAAAAATAACAGGAAGCAACAATTACTTTTCCTTAATATCT
CTTAACATCAATGGTCTCAACTCCCCAATAAAAAGACATAGACTAACAAA
CTGGCTACACAAACAAGACCCAACATTTTGCTGTTTACAGGAGACACATC
TCAGAGAAAAATATATACACTACCTCACAATAAAAGGCTGGAAAACAATT
TTCCAAGCAAATGGCACGAACAAACAAGCTGGAGTAGCCATCCTAATATC
TGATAAGATTGACTTCCAACCCAAAGTCATCAAAAAAGACAAGGAGGGGC
ACTTTGTTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCAATTCTG
AATATCTATGCGCCAAATACAAGGGCAGCCACATTCATTAAAGAAACTTT
AGTAAAGCTCATAGCACACATTGCACCTCACACAATAATAGTGGGAGACT
TCAACACACCACTTTCACCAATGGACAGATCATGGAAACAGAAACTATAC
AGGGACACACTGAAACTAACAGAAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCAGTATTCCACCTTCCCCAACAT
CCGGTGGTTGTATAGTGTTAATTTACAAAAACCTCTGTTAACTGATGGCA
GAATCATGCCATTATTAACCACTAATATATCCTCTTTAGTAAAGGGCTCT
TCAGCTGTGTCTATTGATTGCCAGTCACACTTGACTTCAAACTTATAAAT
TCTGACTGTGCTCCACCACCAAATGCATTTTTCTCCTCTGCAGTTTGTAT
TTTAACTCTCTCACTGTTAGATTATTATAAATGTGTAGTTCCCCCCCCCC
CAGGTAAATTGAGTACCTTGGCTAAGCTATAAATAATCATTTCCTACCCA
CAAGGTCACAAGAATGTTCACCTATAGCATCCTCTTATGTGTGAGTGTTT
GATGTACTACCTACAATTAATTTGAGGGAATCTCGTGTAAGAGTCTTTTT
AATTTGATTACCCAATTGACCTATATCTTCCTTTTAAAGTGGAAACTTCT
TCTCTCACAATTCTACGCTATCACCTTGATCACAAATCANAAGAAACAGA
TTTCTAGAGGCTGGGATTTGTAGAANAGGAACATGGAATACCACACCAAG
TATCGTAAACAGTTTTGCTAAGGGTTGATCTCATAGGTGAAGGTAGAGAA
TTTCAAGAGAAACCCAGATAATCTGGAAAGAATGG

Query= MSMg01no309_k10.g1 MSMg01no309_k10.g1 CHROMAT_FILE:
MSMg01no309_k10.g1 PHD_FILE: MSMg01no309_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:18 2005
         (543 letters)



>mm_chr16_50730262_50731204
          Length = 943

 Score = 1029 bits (532), Expect = 0.0
 Identities = 540/543 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagtattccaccttccccaacatccggtggttgtatagtgttaatttacaaaaacctct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcagtattccaccttccccaacatccggtggttgtatagtgttaatttacaaaaacctct 684

                                                                       
Query: 61  gttaactgatggcagaatcatgccattattaaccactaatatatcctctttagtaaaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gttaactgatggcagaatcatgccattattaaccactaatatatcctctttagtaaaggg 624

                                                                       
Query: 121 ctcttcagctgtgtctattgattgccagtcacacttgacttcaaacttataaattctgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ctcttcagctgtgtctattgattgccagtcacacttgacttcaaacttataaattctgac 564

                                                                       
Query: 181 tgtgctccaccaccaaatgcatttttctcctctgcagtttgtattttaactctctcactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tgtgctccaccaccaaatgcatttttctcctctgcagtttgtattttaactctctcactg 504

                                                                       
Query: 241 ttagattattataaatgtgtagttcccccccccccaggtaaattgagtaccttggctaag 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 503 ttagattattataaatgtgtagttccccccccccccggtaaattgagtaccttggctaag 444

                                                                       
Query: 301 ctataaataatcatttcctacccacaaggtcacaagaatgttcacctatagcatcctctt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ctataaataatcatttcctacccacaaggtcacaagaatgttcacctatagcatcctctt 384

                                                                       
Query: 361 atgtgtgagtgtttgatgtactacctacaattaatttgagggaatctcgtgtaagagtct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atgtgtgagtgtttgatgtactacctacaattaatttgagggaatctcgtgtaagagtct 324

                                                                       
Query: 421 ttttaatttgattacccaattgacctatatcttccttttaaagtggaaacttcttctctc 480
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 323 ttttaatttgattacccaattgacctaaatcttccttttaaagtggaaacttcttctctc 264

                                                                       
Query: 481 acaattctacgctatcaccttgatcacaaatcanaagaaacagatttctagaggctggga 540
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 263 acaattctacgctatcaccttgatcacaaatcaaaagaaacagatttctagaggctggga 204

              
Query: 541 ttt 543
           |||
Sbjct: 203 ttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)