Query= MSMg01no311_c21.b1 MSMg01no311_c21.b1 CHROMAT_FILE:
MSMg01no311_c21.b1 PHD_FILE: MSMg01no311_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:57 2005
(323 letters)
>mm_chr16_50001469_50002191
Length = 723
Score = 601 bits (311), Expect = e-176
Identities = 317/319 (99%)
Strand = Plus / Minus
Query: 5 gaattcctagctttgtttaaccgatttccaaggcttctcttcaatctacccagctgaccc 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 523 gaattcctagctttgtttaaccgatttccaaggcttctcttcagtctacccagctgaccc 464
Query: 65 ttgttcatcttggggcctctgtgttgccaagagaaacagaccgtcctcactggattaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttgttcatcttggggcctctgtgttgccaagagaaacagaccgtcctcactggattaaag 404
Query: 125 cattaaagcattctgtagtatataagacaattttgcaccttaaaaaaaatataaagagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cattaaagcattctgtagtatataagacaattttgcaccttaaaaaaaatataaagagaa 344
Query: 185 tcccagtgagcattgcagaaagcctttaggtttttatgcaggcggaaaatctttggtcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tcccagtgagcattgcagaaagcctttaggtttttatgcaggcggaaaatctttggtcaa 284
Query: 245 caagaatggaattatttcaccttcttgcagaaccgagcttctcaaactattgtcattacg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 caagaatggaattatttcaccttcttgcagaaccgagcttctcaaactattgtcattacg 224
Query: 305 tagagaaaatgaaatctcc 323
||||||||||| |||||||
Sbjct: 223 tagagaaaatggaatctcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_c21.g1 MSMg01no311_c21.g1 CHROMAT_FILE:
MSMg01no311_c21.g1 PHD_FILE: MSMg01no311_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:57 2005
(291 letters)
>mm_chr16_49833328_49834018
Length = 691
Score = 547 bits (283), Expect = e-160
Identities = 291/297 (97%), Gaps = 6/297 (2%)
Strand = Plus / Plus
Query: 1 tattagcacatagtgatggtgggctaggaactaaggtttgtatttaacttcacactgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 tattagcacatagtgatggtgggctaggaactaaggtttgtatttaacttcacactgtga 254
Query: 61 ctgaaatt------aaaaaaaaaaaacctttaaaagaagatgtataaaagaggatacctt 114
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgaaattaaaaaaaaaaaaaaaaaacctttaaaagaagatgtataaaagaggatacctt 314
Query: 115 cattcagctagagagcccattcttaaaatgggatataattttggtttcagtgctaagcct 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 cattcagctagagagcccattcttaaaatgggatataattttggtttcagtgctaagcct 374
Query: 175 ttggctcatcatcttactctgtcactaactcactagcatctgacatctttcagagtgagt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttggctcatcatcttactctgtcactaactcactagcatctgacatctttcagagtgagt 434
Query: 235 cgggattcccatagcatatttccagtgcagaggaaacatgatgatggtggatccaaa 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cgggattcccatagcatatttccagtgcagaggaaacatgatgatggtggatccaaa 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
