TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTCTTTGCTTTTTAAGAAAGACTCTCATGTTTTCAGAAGTCAGTGGGAA
AGAATTCTAGTAATTACCGGTGGTGATCCAGTTAGAGGTGTCGATGTGAT
GCAATTGACCACAAAACCGAGGGGGAAAGAATATTCTGGGCCTAATTCCT
AGCACATGAACTTCTAGGCAACACCAAGAACAATATGTCATATGTATGTT
CTTGAGGCCACCAAGAGATGCTGTCTTTCTTCCAGATCCTACTGCCCCTT
TCAAAACCAGAATCCTTAAATAAGAGGTGCCACATCACCCACTACAACCC
AGCACAAACACTGTGTTTTAGGGTGCCACCCAGACATAATGGCACCTTCA
TGAAATAAAGCAAAGACAGAGGATCTCAGCATAGAGATGTCCATAACAGT
GTGCTTAATCATCAACAACCGCTATCCAACAATGTGCAAGCAGCAACACA
CCCATCCACACAGTGTGGCGGGAGAAGGGACAATATAGATTCCATGAGAA
CTGTAAGTTAAGTAAGCAGAAGTGAGCAGCAGATGAAGCTGCTTAATAAA
ACCCGGTTTAAGAAAAAGTTAGTGAACACTACTTTAGCATAATCTTCCTT
TGAAAAAGTGATGATACAACTCAAGATTGCCAGAAGGCTACCCCAGTGAT
AGTCTAGAAAATAAGACAATG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCATTACATCCTCTGAGAACTGCATCTCCTGAG
GTATCCTTAGTTAGCCCTTAGTTAGCCCACTCTTCCTAAGACCTTCACTG
TGTGAGTCAGGCCAGCCTTGGCCTGTGGCTGACCCTTGCTGTTAGTCATA
GCTGCATCCAAATGGGTGCTCTGTATGCCTTCTCCTCAACCCAGCAGCCA
AACTTTCTGCTCACCCCAACTTCCCTTATTACTTCTGTTTCTGGGTAAAC
TATTCATCGCCCCATAGATTTGGTCACTTATTTGTTTCTTAGAGCAAATG
TGTTTNGTACTCCACCGNTCCACGCCGTTGGGGATGGGGGGAAAGTTATC
AACCTGTGGCCTCAATACAAAAAAAGAACAAACAACCCTTTTACAGGGTA
GAATAGAATTTACCACATTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTTCNCAGGTTACGTTCCTATGTTTATAGGTCATAGG
ACATCTGGTCTCCCGCCTGATTACTTTCTTTTTTTTTTTCTTTCGACACG
GGTCTCTCCCTGAATATTACGCCTGTTCTGGTTGCCAATTTTTCTTCTTA
TTTCTTTAGTGTCCTATCCCTAAAGTGGCCTATATTCCTTCCTAACTTCT
CGGGTTTTTTCTTTCTCTCTCATTCTT

Query= MSMg01no312_d17.b1 MSMg01no312_d17.b1 CHROMAT_FILE:
MSMg01no312_d17.b1 PHD_FILE: MSMg01no312_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:15 2005
         (320 letters)



>mm_chr16_24427489_24428208
          Length = 720

 Score =  596 bits (308), Expect = e-175
 Identities = 311/312 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctctttgctttttaagaaagactctcatgttttcagaagtcagtgggaaagaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattcctctttgctttttaagaaagactctcatgttttcagaagtcagtgggaaagaat 457

                                                                       
Query: 65  tctagtaattaccggtggtgatccagttagaggtgtcgatgtgatgcaattgaccacaaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctagtaattaccggtggtgatccagttagaggtgtcgatgtgatgcaattgaccacaaa 397

                                                                       
Query: 125 accgagggggaaagaatattctgggcctaattcctagcacatgaacttctaggcaacacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 accgagggggaaagaatattctgggcctaattcctagcacatgaacttctaggcaacacc 337

                                                                       
Query: 185 aagaacaatatgtcatatgtatgttcttgaggccaccaagagatgctgtctttcttccag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aagaacaatatgtcatatgtatgttcttgaggccaccaagagatgctgtctttcttccag 277

                                                                       
Query: 245 atcctactgcccctttcaaaaccagaatccttaaataagaggtgccacatcacccactac 304
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atcctactgcccctttcaaaaacagaatccttaaataagaggtgccacatcacccactac 217

                       
Query: 305 aacccagcacaa 316
           ||||||||||||
Sbjct: 216 aacccagcacaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space:   221121
Effective search space used:   221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no312_d17.g1 MSMg01no312_d17.g1 CHROMAT_FILE:
MSMg01no312_d17.g1 PHD_FILE: MSMg01no312_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:16 2005
         (287 letters)



>mm_chr16_24361658_24362344
          Length = 687

 Score =  543 bits (281), Expect = e-159
 Identities = 284/285 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cattacatcctctgagaactgcatctcctgaggtatccttagttagcccttagttagccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattacatcctctgagaactgcatctcctgaggtatccttagttagcccttagttagccc 260

                                                                       
Query: 61  actcttcctaagaccttcactgtgtgagtcaggccagccttggcctgtggctgacccttg 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 actcttcctaagaccttcactgtgtgagtcaggccagccttggcctttggctgacccttg 320

                                                                       
Query: 121 ctgttagtcatagctgcatccaaatgggtgctctgtatgccttctcctcaacccagcagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgttagtcatagctgcatccaaatgggtgctctgtatgccttctcctcaacccagcagc 380

                                                                       
Query: 181 caaactttctgctcaccccaacttcccttattacttctgtttctgggtaaactattcatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaactttctgctcaccccaacttcccttattacttctgtttctgggtaaactattcatc 440

                                                        
Query: 241 gccccatagatttggtcacttatttgtttcttagagcaaatgtgt 285
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gccccatagatttggtcacttatttgtttcttagagcaaatgtgt 485


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space:   188484
Effective search space used:   188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)