Query= MSMg01no313_l07.b1 MSMg01no313_l07.b1 CHROMAT_FILE:
MSMg01no313_l07.b1 PHD_FILE: MSMg01no313_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:43 2005
(694 letters)
>mm_chr16_96852437_96853530
Length = 1094
Score = 1220 bits (631), Expect = 0.0
Identities = 684/715 (95%), Gaps = 26/715 (3%)
Strand = Plus / Minus
Query: 1 aacttcctgtctaaaccttctgag-------------------tggggtctgcctccccc 41
|||||||||||||||||||||||| ||||||||| |||||
Sbjct: 946 aacttcctgtctaaaccttctgagtaagagacatgatgaatgctggggtctg---ccccc 890
Query: 42 ccccccgaccctctaccaccatgtttgcaagcagcatccccctcatcttagccaggtaac 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ccccccgaccctctaccaccatgtttgcaagcagcatccccctcatcttagccaggtaac 830
Query: 102 agctttcagaccacactagtcacctctatgatgttggggccaccctcatccatcaccatg 161
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 agttttcagaccacactagtcacctctatgatgttggggccaccctcatccatcaccatg 770
Query: 162 caagcgaactctctattgagtaaaacagagctgtcctttcctgaacacacacattattcc 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 caagcgaactctctattgagtaaaacagagctgtcctttcctgaacacacacattattcc 710
Query: 222 agtgcctgtaaattttctgtggagcgcatggcccaccaattctaacccctcaagttcc-a 280
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 709 agtgcctgtaaattttctgtggagcgcatggcccaccaattctaacccctcaagttccaa 650
Query: 281 gttctcttctaaacagatcagtctccctagctcctgagattggcccatcctgatactccg 340
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 649 g-tctcttctaaacagatcagtctccctagctcctgagattggcccatcctgatacacc- 592
Query: 341 a-tatccttagataatttcccttaccctgctgaaaacaggtgtctgttccttggtacccc 399
| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 591 actatccttagataatttcccttaccctgctgaggccaggtgtctgttccttggtacccc 532
Query: 400 tcagggtctgactctcattctgctccaggtatcaaggaccactaaaacagcaaagaaatt 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tcagggtctgactctcattctgctccaggtatcaaggaccactaaaacagcaaagaaatt 472
Query: 460 gtccgtgctgtaaacactggacagacctctcaccactggacatattcacaactcactctc 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtccgtgctgtaaacactggacagacctctcaccactggacatattcacaactcactctc 412
Query: 520 ctcatctctaaatgccacatagtaatactaagagggacttaacctgcactcctaagaagc 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctcatctctaaatgccacatagtaatactaagagggacttaacctgcactcctaagaagc 352
Query: 580 atggtatgatacagatccttagagcatgctccagggtcatgctaccctactcaggccatc 639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atggtatgatacagatccttagagcatgctccagggtcatgctaccctactcaggccatc 292
Query: 640 caaactccaaactactcagcttagttccagggagcttgtagaaagaaggaattcc 694
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 caaactccaaactactcagcttagttccagggagcttgtagaaagaaggaattcc 237
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1094
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1084
Effective search space: 741456
Effective search space used: 741456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_l07.g1 MSMg01no313_l07.g1 CHROMAT_FILE:
MSMg01no313_l07.g1 PHD_FILE: MSMg01no313_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:43 2005
(323 letters)
>mm_chr16_96691185_96691907
Length = 723
Score = 592 bits (306), Expect = e-173
Identities = 318/322 (98%)
Strand = Plus / Plus
Query: 1 gtcctacaccccaacttccccttgcaccaggtttgtctttttcattcccaccgctccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 gtcctacaccccaacttccccttgcaccaggtttgtctttttcattcccaccgctgcccc 260
Query: 61 tgagctccccctgctggctcatttccaagtccctagaccgccggtattctttggagaaaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tgagctccccctgctggctcatttccaagtccctagaccgctggtattctttggagaaaa 320
Query: 121 gaaatttctcctttgattaaaacttaaatctgctttcaacatttaataagagggacaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatttctcctttgattaaaacttaaatctgctttcaacatttaataagagggacaaac 380
Query: 181 agccaaggagctggggagggcaccaagtcctgaagtgtttctttagttgaatgaactaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccaaggagctggggagggcaccaagtcctgaagtgtttctttagttgaatgaactaca 440
Query: 241 aatggcttccagtgttaataactcccaggcattattggaggcacactgtcattaatgtgc 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 aatggcttccagtgttaataactcccaggcaggattggaggcacactgtcattaatgtgc 500
Query: 301 ttgtatgagtagttgctggtca 322
||||||||||||||||||||||
Sbjct: 501 ttgtatgagtagttgctggtca 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
